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Merge remote-tracking branch 'origin/develop' into develop

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This commit is contained in:
sebastianp 2016-06-29 15:31:00 +02:00
commit 4f47f9f343
9 changed files with 154 additions and 92 deletions
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43
pylot/core/active/ActiveSeismoPick3D_GUI.py
View File

@ -9,6 +9,7 @@ from PySide import QtCore, QtGui, QtCore
from asp3d_layout import * from asp3d_layout import *
from fmtomo_parameters_layout import * from fmtomo_parameters_layout import *
from generate_survey_layout import * from generate_survey_layout import *
from generate_survey_layout_minimal import *
from generate_seisarray_layout import * from generate_seisarray_layout import *
from picking_parameters_layout import * from picking_parameters_layout import *
from pylot.core.active import activeSeismoPick, surveyUtils, fmtomoUtils, seismicArrayPreparation from pylot.core.active import activeSeismoPick, surveyUtils, fmtomoUtils, seismicArrayPreparation
@ -85,6 +86,34 @@ class gui_control(object):
if self.checkSurveyState(): if self.checkSurveyState():
if not self.continueDialogExists('Survey'): if not self.continueDialogExists('Survey'):
return return
if self.checkSeisArrayState():
if self.continueDialogMessage('Use geometry information of active Seismic Array?'):
if self.gen_survey_fromSeisArray():
self.initNewSurvey()
else:
if self.gen_survey_fromSRfiles():
self.initNewSurvey()
def initNewSurvey(self):
self.survey.setArtificialPick(0, 0) # artificial pick at source origin
surveyUtils.setDynamicFittedSNR(self.survey.getShotDict())
self.setSurveyState(True)
self.setPickState(False)
def gen_survey_fromSeisArray(self):
qdialog = QtGui.QDialog(self.mainwindow)
ui = Ui_generate_survey_minimal()
ui.setupUi(qdialog)
self.gen_new_survey_min = ui
self.connectButtons_gen_survey_min()
if qdialog.exec_():
obsdir = self.gen_new_survey_min.lineEdit_obs.text()
self.survey = activeSeismoPick.Survey(obsdir, seisArray = self.seisarray,
useDefaultParas = True)
self.setConnected2SurveyState(True)
return True
def gen_survey_fromSRfiles(self):
qdialog = QtGui.QDialog(self.mainwindow) qdialog = QtGui.QDialog(self.mainwindow)
ui = Ui_generate_survey() ui = Ui_generate_survey()
ui.setupUi(qdialog) ui.setupUi(qdialog)
@ -96,11 +125,8 @@ class gui_control(object):
obsdir = self.gen_new_survey.lineEdit_obs.text() obsdir = self.gen_new_survey.lineEdit_obs.text()
self.survey = activeSeismoPick.Survey(obsdir, srcfile, recfile, self.survey = activeSeismoPick.Survey(obsdir, srcfile, recfile,
useDefaultParas = True) useDefaultParas = True)
self.survey.setArtificialPick(0, 0) # artificial pick at source origin
surveyUtils.setDynamicFittedSNR(self.survey.getShotDict())
self.setSurveyState(True)
self.setPickState(False)
self.setConnected2SurveyState(False) self.setConnected2SurveyState(False)
return True
def addArrayPlot(self): def addArrayPlot(self):
self.seisArrayFigure = Figure() self.seisArrayFigure = Figure()
@ -182,6 +208,7 @@ class gui_control(object):
pass pass
self.survey.seisarray = self.seisarray self.survey.seisarray = self.seisarray
self.setConnected2SurveyState(True) self.setConnected2SurveyState(True)
self.survey._initiate_SRfiles()
print('Connected Seismic Array to active Survey object.') print('Connected Seismic Array to active Survey object.')
def getMaxCPU(self): def getMaxCPU(self):
@ -393,7 +420,7 @@ class gui_control(object):
if self.checkSurveyState(): if self.checkSurveyState():
self.statFigure_left.clf() self.statFigure_left.clf()
self.statFigure_right.clf() self.statFigure_right.clf()
self.mainUI.comboBox.setEnabled(True) self.mainUI.comboBox.setEnabled(False)
self.survey.picked = False self.survey.picked = False
def setSeisArrayState(self, state): def setSeisArrayState(self, state):
@ -458,6 +485,9 @@ class gui_control(object):
QtCore.QObject.connect(self.gen_new_survey.pushButton_src, QtCore.SIGNAL("clicked()"), self.chooseSourcefile) QtCore.QObject.connect(self.gen_new_survey.pushButton_src, QtCore.SIGNAL("clicked()"), self.chooseSourcefile)
QtCore.QObject.connect(self.gen_new_survey.pushButton_obs, QtCore.SIGNAL("clicked()"), self.chooseObsdir) QtCore.QObject.connect(self.gen_new_survey.pushButton_obs, QtCore.SIGNAL("clicked()"), self.chooseObsdir)
def connectButtons_gen_survey_min(self):
QtCore.QObject.connect(self.gen_new_survey_min.pushButton_obs, QtCore.SIGNAL("clicked()"), self.chooseObsdir_min)
def connectButtons_gen_seisarray(self): def connectButtons_gen_seisarray(self):
QtCore.QObject.connect(self.gen_new_seisarray.pushButton_rec, QtCore.SIGNAL("clicked()"), self.chooseMeasuredRec) QtCore.QObject.connect(self.gen_new_seisarray.pushButton_rec, QtCore.SIGNAL("clicked()"), self.chooseMeasuredRec)
QtCore.QObject.connect(self.gen_new_seisarray.pushButton_src, QtCore.SIGNAL("clicked()"), self.chooseMeasuredSrc) QtCore.QObject.connect(self.gen_new_seisarray.pushButton_src, QtCore.SIGNAL("clicked()"), self.chooseMeasuredSrc)
@ -481,6 +511,9 @@ class gui_control(object):
def chooseObsdir(self): def chooseObsdir(self):
self.gen_new_survey.lineEdit_obs.setText(self.browseDir('Choose observation directory.')) self.gen_new_survey.lineEdit_obs.setText(self.browseDir('Choose observation directory.'))
def chooseObsdir_min(self):
self.gen_new_survey_min.lineEdit_obs.setText(self.browseDir('Choose observation directory.'))
def openFile(self, name = 'Open'): def openFile(self, name = 'Open'):
dialog = QtGui.QFileDialog() dialog = QtGui.QFileDialog()
dialog.setWindowTitle(name) #not working yet dialog.setWindowTitle(name) #not working yet

68
pylot/core/active/activeSeismoPick.py
View File

@ -13,7 +13,7 @@ def picker(shot):
return picks return picks
class Survey(object): class Survey(object):
def __init__(self, path, sourcefile, receiverfile, useDefaultParas=False): def __init__(self, path, sourcefile = None, receiverfile = None, seisArray = None, useDefaultParas=False):
''' '''
The Survey Class contains all shots [class: Seismicshot] of a survey The Survey Class contains all shots [class: Seismicshot] of a survey
as well as the aquisition geometry and the topography. as well as the aquisition geometry and the topography.
@ -24,23 +24,61 @@ class Survey(object):
creating plots for all shots. creating plots for all shots.
''' '''
self.data = {} self.data = {}
self.seisarray = None self.seisarray = seisArray
self._topography = None self._topography = None
self._recfile = receiverfile self._recfile = receiverfile
self._sourcefile = sourcefile self._sourcefile = sourcefile
self._obsdir = path self._obsdir = path
self._generateSurvey() self._generateSurvey()
self._initiate_fnames() self._initiate_SRfiles()
if useDefaultParas == True: if useDefaultParas == True:
self.setParametersForAllShots() self.setParametersForAllShots()
self._removeAllEmptyTraces() self._removeAllEmptyTraces()
self._updateShots() self._updateShots()
self.picked = False self.picked = False
def _initiate_fnames(self): def _coordsFromSeisArray(self):
for shot in self.data.values(): self._receiverCoords = self.seisarray.getReceiverCoordinates()
shot.setRecfile(self.getReceiverfile()) self._sourceCoords = self.seisarray.getSourceCoordinates()
shot.setSourcefile(self.getSourcefile())
def _coordsFromFiles(self):
self._receiversFromFile()
self._sourcesFromFile()
def _receiversFromFile(self):
self._receiverCoords = {}
reclist = open(self.getReceiverfile(), 'r').readlines()
for line in reclist:
line = line.split()
traceID = int(line[0])
x = float(line[1])
y = float(line[2])
z = float(line[3])
self._receiverCoords[traceID] = (x, y, z)
def _sourcesFromFile(self):
self._sourceCoords = {}
reclist = open(self.getSourcefile(), 'r').readlines()
for line in reclist:
line = line.split()
sourceID = int(line[0])
x = float(line[1])
y = float(line[2])
z = float(line[3])
self._sourceCoords[sourceID] = (x, y, z)
def _initiate_SRfiles(self):
if self._recfile == None and self._sourcefile == None:
if self.seisarray == None:
raise RuntimeError('No SeisArray defined. No source or receiver file given.')
self._coordsFromSeisArray()
else:
self._coordsFromFiles()
for shotnumber in self.data.keys():
shot = self.data[shotnumber]
shot.setShotnumber(shotnumber)
shot.setReceiverCoords(self._receiverCoords)
shot.setSourceCoords(self._sourceCoords[shotnumber])
def _generateSurvey(self): def _generateSurvey(self):
from obspy.core import read from obspy.core import read
@ -49,8 +87,8 @@ class Survey(object):
shotlist = self.getShotlist() shotlist = self.getShotlist()
for shotnumber in shotlist: # loop over data files for shotnumber in shotlist: # loop over data files
# generate filenames and read manual picks to a list # generate filenames and read manual picks to a list
#fileending = '_pickle.dat' fileending = '_pickle.dat'
fileending = '.sg2' #fileending = '.sg2'
obsfile = os.path.join(self._obsdir, str(shotnumber)) + fileending obsfile = os.path.join(self._obsdir, str(shotnumber)) + fileending
if obsfile not in shot_dict.keys(): if obsfile not in shot_dict.keys():
shot_dict[shotnumber] = [] shot_dict[shotnumber] = []
@ -372,12 +410,17 @@ class Survey(object):
''' '''
Returns a list of all shotnumbers contained in the set Sourcefile. Returns a list of all shotnumbers contained in the set Sourcefile.
''' '''
if self._recfile == None and self._sourcefile == None:
if self.seisarray == None:
raise RuntimeError('No SeisArray defined. No source or receiver file given.')
return self.seisarray.getSourceCoordinates().keys()
filename = self.getSourcefile() filename = self.getSourcefile()
srcfile = open(filename, 'r') srcfile = open(filename, 'r')
shotlist = [] shotlist = []
for line in srcfile.readlines(): for line in srcfile.readlines():
line = line.split() line = line.split()
shotlist.append(line[0]) shotlist.append(int(line[0]))
return shotlist return shotlist
@ -385,6 +428,11 @@ class Survey(object):
''' '''
Returns a list of all trace IDs contained in the set Receiverfile. Returns a list of all trace IDs contained in the set Receiverfile.
''' '''
if self._recfile == None and self._sourcefile == None:
if self.seisarray == None:
raise RuntimeError('No SeisArray defined. No source or receiver file given.')
return self.seisarray.getReceiverCoordinates().keys()
filename = self.getReceiverfile() filename = self.getReceiverfile()
recfile = open(filename, 'r') recfile = open(filename, 'r')
reclist = [] reclist = []

2
pylot/core/active/asp3d_layout.py
View File

@ -2,7 +2,7 @@
# Form implementation generated from reading ui file 'asp3d_layout.ui' # Form implementation generated from reading ui file 'asp3d_layout.ui'
# #
# Created: Mon Jun 27 15:18:25 2016 # Created: Tue Jun 28 14:40:06 2016
# by: pyside-uic 0.2.15 running on PySide 1.2.2 # by: pyside-uic 0.2.15 running on PySide 1.2.2
# #
# WARNING! All changes made in this file will be lost! # WARNING! All changes made in this file will be lost!

2
pylot/core/active/fmtomo_parameters_layout.py
View File

@ -2,7 +2,7 @@
# Form implementation generated from reading ui file 'fmtomo_parameters_layout.ui' # Form implementation generated from reading ui file 'fmtomo_parameters_layout.ui'
# #
# Created: Mon Jun 27 15:18:25 2016 # Created: Tue Jun 28 14:40:06 2016
# by: pyside-uic 0.2.15 running on PySide 1.2.2 # by: pyside-uic 0.2.15 running on PySide 1.2.2
# #
# WARNING! All changes made in this file will be lost! # WARNING! All changes made in this file will be lost!

10
pylot/core/active/generate_seisarray_layout.py
View File

@ -2,7 +2,7 @@
# Form implementation generated from reading ui file 'generate_seisarray_layout.ui' # Form implementation generated from reading ui file 'generate_seisarray_layout.ui'
# #
# Created: Mon Jun 27 15:18:25 2016 # Created: Tue Jun 28 14:40:06 2016
# by: pyside-uic 0.2.15 running on PySide 1.2.2 # by: pyside-uic 0.2.15 running on PySide 1.2.2
# #
# WARNING! All changes made in this file will be lost! # WARNING! All changes made in this file will be lost!
@ -99,9 +99,9 @@ class Ui_generate_seisarray(object):
"<html><head><meta name=\"qrichtext\" content=\"1\" /><style type=\"text/css\">\n" "<html><head><meta name=\"qrichtext\" content=\"1\" /><style type=\"text/css\">\n"
"p, li { white-space: pre-wrap; }\n" "p, li { white-space: pre-wrap; }\n"
"</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n" "</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load receiver input file. The input file must be in the following format:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load<span style=\" font-weight:600;\"> measured </span>receiver input file. The input file must be in the following format:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, seperated by spaces:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, separated by spaces:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[trace ID (int)] [receiver line ID (int)] [number of the geophone on receiver line (int)] [X (float)] [Y (float)] [Z (float)]</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[trace ID (int)] [receiver line ID (int)] [number of the geophone on receiver line (int)] [X (float)] [Y (float)] [Z (float)]</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
@ -117,7 +117,7 @@ class Ui_generate_seisarray(object):
"</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n" "</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load measured sources input file to improve interpolation precision. The input file must be in the following format:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load measured sources input file to improve interpolation precision. The input file must be in the following format:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, seperated by spaces:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, separated by spaces:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[source ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[source ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
@ -133,7 +133,7 @@ class Ui_generate_seisarray(object):
"</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n" "</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load measured points input file to improve interpolation precision. The input file must be in the following format:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load measured points input file to improve interpolation precision. The input file must be in the following format:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, seperated by spaces:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, separated by spaces:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[point ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[point ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"

6
pylot/core/active/generate_survey_layout.py
View File

@ -2,7 +2,7 @@
# Form implementation generated from reading ui file 'generate_survey_layout.ui' # Form implementation generated from reading ui file 'generate_survey_layout.ui'
# #
# Created: Mon Jun 27 15:18:25 2016 # Created: Tue Jun 28 14:40:06 2016
# by: pyside-uic 0.2.15 running on PySide 1.2.2 # by: pyside-uic 0.2.15 running on PySide 1.2.2
# #
# WARNING! All changes made in this file will be lost! # WARNING! All changes made in this file will be lost!
@ -68,7 +68,7 @@ class Ui_generate_survey(object):
"</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n" "</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load receiver input file. The input file must be in the following format:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load receiver input file. The input file must be in the following format:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, seperated by spaces:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, separated by spaces:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[trace ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[trace ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
@ -99,7 +99,7 @@ class Ui_generate_survey(object):
"</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n" "</style></head><body style=\" font-family:\'Sans\'; font-size:10pt; font-weight:400; font-style:normal;\">\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load sources input file. The input file must be in the following format:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Load sources input file. The input file must be in the following format:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, seperated by spaces:</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">Containing in each line, separated by spaces:</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"
"<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[trace ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n" "<p style=\" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\">[trace ID (int)] [X (float)] [Y (float)] [Z (float)]</p>\n"
"<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n" "<p style=\"-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px;\"></p>\n"

2
pylot/core/active/picking_parameters_layout.py
View File

@ -2,7 +2,7 @@
# Form implementation generated from reading ui file 'picking_parameters_layout.ui' # Form implementation generated from reading ui file 'picking_parameters_layout.ui'
# #
# Created: Mon Jun 27 15:18:25 2016 # Created: Tue Jun 28 14:40:07 2016
# by: pyside-uic 0.2.15 running on PySide 1.2.2 # by: pyside-uic 0.2.15 running on PySide 1.2.2
# #
# WARNING! All changes made in this file will be lost! # WARNING! All changes made in this file will be lost!

28
pylot/core/active/seismicArrayPreparation.py
View File

@ -23,7 +23,7 @@ class SeisArray(object):
self._receiverCoords = {} self._receiverCoords = {}
self._measuredReceivers = {} self._measuredReceivers = {}
self._measuredTopo = {} self._measuredTopo = {}
self._sourceLocs = {} self._sourceCoords = {}
self._geophoneNumbers = {} self._geophoneNumbers = {}
self._receiverlist = open(self.recfile, 'r').readlines() self._receiverlist = open(self.recfile, 'r').readlines()
self._generateReceiverlines() self._generateReceiverlines()
@ -79,13 +79,13 @@ class SeisArray(object):
return self._receiverCoords[traceID][2] return self._receiverCoords[traceID][2]
def _getXshot(self, shotnumber): def _getXshot(self, shotnumber):
return self._sourceLocs[shotnumber][0] return self._sourceCoords[shotnumber][0]
def _getYshot(self, shotnumber): def _getYshot(self, shotnumber):
return self._sourceLocs[shotnumber][1] return self._sourceCoords[shotnumber][1]
def _getZshot(self, shotnumber): def _getZshot(self, shotnumber):
return self._sourceLocs[shotnumber][2] return self._sourceCoords[shotnumber][2]
def _getReceiverValue(self, traceID, coordinate): def _getReceiverValue(self, traceID, coordinate):
setCoordinate = {'X': self._getXreceiver, setCoordinate = {'X': self._getXreceiver,
@ -102,8 +102,8 @@ class SeisArray(object):
def getMeasuredTopo(self): def getMeasuredTopo(self):
return self._measuredTopo return self._measuredTopo
def getSourceLocations(self): def getSourceCoordinates(self):
return self._sourceLocs return self._sourceCoords
def _setXvalue(self, traceID, value): def _setXvalue(self, traceID, value):
self._checkKey(traceID) self._checkKey(traceID)
@ -209,7 +209,7 @@ class SeisArray(object):
x = float(line[1]) x = float(line[1])
y = float(line[2]) y = float(line[2])
z = float(line[3]) z = float(line[3])
self._sourceLocs[pointID] = (x, y, z) self._sourceCoords[pointID] = (x, y, z)
def interpZcoords4rec(self, method='linear'): def interpZcoords4rec(self, method='linear'):
''' '''
@ -274,10 +274,10 @@ class SeisArray(object):
x = []; x = [];
y = []; y = [];
z = [] z = []
for pointID in self.getSourceLocations().keys(): for pointID in self.getSourceCoordinates().keys():
x.append(self.getSourceLocations()[pointID][0]) x.append(self.getSourceCoordinates()[pointID][0])
y.append(self.getSourceLocations()[pointID][1]) y.append(self.getSourceCoordinates()[pointID][1])
z.append(self.getSourceLocations()[pointID][2]) z.append(self.getSourceCoordinates()[pointID][2])
return x, y, z return x, y, z
def getAllMeasuredPointsLists(self): def getAllMeasuredPointsLists(self):
@ -457,7 +457,7 @@ class SeisArray(object):
outfile = open(outfilename, 'w') outfile = open(outfilename, 'w')
recx, recy, recz = self.getReceiverLists() recx, recy, recz = self.getReceiverLists()
nsrc = len(self.getSourceLocations()) nsrc = len(self.getSourceCoordinates())
outfile.write('%s\n' % (len(zip(recx, recy, recz)) * nsrc)) outfile.write('%s\n' % (len(zip(recx, recy, recz)) * nsrc))
for index in range(nsrc): for index in range(nsrc):
@ -816,7 +816,7 @@ class SeisArray(object):
for traceID in self.getReceiverCoordinates().keys(): for traceID in self.getReceiverCoordinates().keys():
ax.annotate((' ' + str(traceID)), xy=(self._getXreceiver(traceID), self._getYreceiver(traceID)), ax.annotate((' ' + str(traceID)), xy=(self._getXreceiver(traceID), self._getYreceiver(traceID)),
fontsize='x-small', color='k') fontsize='x-small', color='k')
for shotnumber in self.getSourceLocations().keys(): for shotnumber in self.getSourceCoordinates().keys():
ax.annotate((' ' + str(shotnumber)), xy=(self._getXshot(shotnumber), self._getYshot(shotnumber)), ax.annotate((' ' + str(shotnumber)), xy=(self._getXshot(shotnumber), self._getYshot(shotnumber)),
fontsize='x-small', color='b') fontsize='x-small', color='b')
@ -994,7 +994,7 @@ class SeisArray(object):
outfile = open(filename, 'w') outfile = open(filename, 'w')
shotnumbers = [] shotnumbers = []
for shotnumber in self.getSourceLocations(): for shotnumber in self.getSourceCoordinates():
shotnumbers.append(shotnumber) shotnumbers.append(shotnumber)
nPoints = len(shotnumbers) nPoints = len(shotnumbers)

85
pylot/core/active/seismicshot.py
View File

@ -24,7 +24,6 @@ class SeismicShot(object):
''' '''
SuperClass for a seismic shot object. SuperClass for a seismic shot object.
''' '''
def __init__(self, obsfile): def __init__(self, obsfile):
''' '''
Initialize seismic shot object giving an inputfile. Initialize seismic shot object giving an inputfile.
@ -34,8 +33,8 @@ class SeismicShot(object):
''' '''
self.traces = read(obsfile) self.traces = read(obsfile)
self.renameChannelIDs() self.renameChannelIDs()
self.recCoordlist = None # self.recCoordlist = None
self.srcCoordlist = None # self.srcCoordlist = None
self.traceIDs = None self.traceIDs = None
self.picks = {} self.picks = {}
self.pwindow = {} self.pwindow = {}
@ -55,10 +54,8 @@ class SeismicShot(object):
def removeEmptyTraces(self): def removeEmptyTraces(self):
traceIDs = [] traceIDs = []
coordlist = self.getRecCoordlist()
removed = [] removed = []
for i in range(0, len(coordlist)): traceIDs = self.getReceiverCoords().keys()
traceIDs.append(int(coordlist[i].split()[0]))
for trace in self.traces: for trace in self.traces:
try: try:
@ -110,14 +107,14 @@ class SeismicShot(object):
def setTgap(self, tgap): def setTgap(self, tgap):
self.setParameters('tgap', tgap) self.setParameters('tgap', tgap)
def setShotnumber(self, shotname): def setShotnumber(self, shotnumber):
self.setParameters('shotname', shotname) self.setParameters('shotnumber', shotnumber)
def setRecfile(self, recfile): def setReceiverCoords(self, receiver):
self.setParameters('recfile', recfile) self.setParameters('receiverLoc', receiver)
def setSourcefile(self, sourcefile): def setSourceCoords(self, source):
self.setParameters('sourcefile', sourcefile) self.setParameters('sourceLoc', source)
def setMethod(self, method): def setMethod(self, method):
self.setParameters('method', method) self.setParameters('method', method)
@ -159,8 +156,14 @@ class SeismicShot(object):
def getParas(self): def getParas(self):
return self.paras return self.paras
def getShotname(self): def getShotnumber(self):
return self.paras['shotname'] return self.paras['shotnumber']
def getSourceCoords(self):
return self.paras['sourceLoc']
def getReceiverCoords(self):
return self.paras['receiverLoc']
def getCut(self): def getCut(self):
return self.paras['cut'] return self.paras['cut']
@ -180,12 +183,6 @@ class SeismicShot(object):
def getShotnumber(self): def getShotnumber(self):
return self.paras['shotnumber'] return self.paras['shotnumber']
def getRecfile(self):
return self.paras['recfile']
def getSourcefile(self):
return self.paras['sourcefile']
def getVmin(self): def getVmin(self):
return self.paras['vmin'] return self.paras['vmin']
@ -237,15 +234,12 @@ class SeismicShot(object):
def getTraceIDlist(self): def getTraceIDlist(self):
''' '''
Returns a list containing the traceIDs read from the receiver inputfile. Returns a list containing the traceIDs.
''' '''
traceIDs = [] traceIDs = []
if self.traceIDs == None: if self.traceIDs == None:
recCoordlist = self.getRecCoordlist() traceIDs = self.getReceiverCoords().keys()
for i in range(0, len(recCoordlist)):
traceIDs.append(int(recCoordlist[i].split()[0]))
self.traceIDs = traceIDs self.traceIDs = traceIDs
return self.traceIDs return self.traceIDs
def getPickwindow(self, traceID): def getPickwindow(self, traceID):
@ -262,19 +256,19 @@ class SeismicShot(object):
def getSNRthreshold(self, traceID): def getSNRthreshold(self, traceID):
return self.snrthreshold[traceID] return self.snrthreshold[traceID]
def getRecCoordlist(self): # def getRecCoordlist(self):
if self.recCoordlist is None: # if self.recCoordlist is None:
coordlist = open(self.getRecfile(), 'r').readlines() # coordlist = open(self.getRecfile(), 'r').readlines()
# print 'Reading receiver coordinates from %s' %(self.getRecfile()) # # print 'Reading receiver coordinates from %s' %(self.getRecfile())
self.recCoordlist = coordlist # self.recCoordlist = coordlist
return self.recCoordlist # return self.recCoordlist
def getSrcCoordlist(self): # def getSrcCoordlist(self):
if self.srcCoordlist is None: # if self.srcCoordlist is None:
coordlist = open(self.getSourcefile(), 'r').readlines() # coordlist = open(self.getSourcefile(), 'r').readlines()
# print 'Reading shot coordinates from %s' %(self.getSourcefile()) # # print 'Reading shot coordinates from %s' %(self.getSourcefile())
self.srcCoordlist = coordlist # self.srcCoordlist = coordlist
return self.srcCoordlist # return self.srcCoordlist
def getTimeArray(self, traceID): def getTimeArray(self, traceID):
return self.timeArray[traceID] return self.timeArray[traceID]
@ -484,13 +478,7 @@ class SeismicShot(object):
if traceID == 0: # artificial traceID 0 with pick at t = 0 if traceID == 0: # artificial traceID 0 with pick at t = 0
return self.getSrcLoc() return self.getSrcLoc()
coordlist = self.getRecCoordlist() return self.getReceiverCoords()[traceID]
for i in range(0, len(coordlist)):
if int(coordlist[i].split()[0]) == traceID:
x = coordlist[i].split()[1]
y = coordlist[i].split()[2]
z = coordlist[i].split()[3]
return float(x), float(y), float(z)
raise ValueError("traceID %s not found" % traceID) raise ValueError("traceID %s not found" % traceID)
@ -499,14 +487,7 @@ class SeismicShot(object):
Returns the location (x, y, z) of the shot. Returns the location (x, y, z) of the shot.
SOURCE FILE MUST BE SET FIRST, TO BE IMPROVED. SOURCE FILE MUST BE SET FIRST, TO BE IMPROVED.
''' '''
coordlist = self.getSrcCoordlist() return self.getSourceCoords()
for i in range(0, len(coordlist)):
if coordlist[i].split()[0] == self.paras['shotnumber']:
x = coordlist[i].split()[1]
y = coordlist[i].split()[2]
z = coordlist[i].split()[3]
return float(x), float(y), float(z)
# return float(self.getSingleStream(traceID)[0].stats.seg2['SOURCE_LOCATION'])
def getTraceIDs4Dist(self, distance=0, def getTraceIDs4Dist(self, distance=0,
distancebin=(0, 0)): ########## nur fuer 2D benutzt, 'distance bins' ########## distancebin=(0, 0)): ########## nur fuer 2D benutzt, 'distance bins' ##########