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small changes for synthetic tests

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This commit is contained in:
Marcel Paffrath 2016-08-15 13:35:01 +02:00
parent c72ed1e169
commit 5228657a60
1 changed files with 11 additions and 4 deletions
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13
pylot/core/active/fmtomoUtils.py
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@ -6,16 +6,23 @@ import datetime
import numpy as np import numpy as np
class Tomo3d(object): class Tomo3d(object):
def __init__(self, fmtomodir, simuldir = 'fmtomo_simulation', citer = 0, overwrite = False): def __init__(self, fmtomodir, simuldir = 'fmtomo_simulation', citer = 0, overwrite = False, buildObs = True):
''' '''
Class build from FMTOMO script tomo3d. Can be used to run several instances of FMM code in parallel. Class build from FMTOMO script tomo3d. Can be used to run several instances of FMM code in parallel.
:param: citer, current iteration (default = 0: start new model) :param: citer, current iteration (default = 0: start new model)
:type: integer :type: integer
:param: fmtomodir, directory containing a clean FMTOMO installation (v. 1.0)
:type: string (path)
:param: simuldir, simulation directory (must contain FMTOMO input grid files)
:type: string (path)
''' '''
self.simuldir = simuldir self.simuldir = simuldir
self.setCWD() self.setCWD()
self.buildFmtomodir(fmtomodir) self.buildFmtomodir(fmtomodir)
if buildObs:
self.buildObsdata() self.buildObsdata()
self.defParas() self.defParas()
self.copyRef() self.copyRef()
@ -87,7 +94,7 @@ class Tomo3d(object):
Initiates inversion parameters for FMTOMO. Initiates inversion parameters for FMTOMO.
''' '''
# Name of program for performing inversion # Name of program for performing inversion
self.inv = '{0}/invert3d'.format(self.cwd) self.inv = os.path.join(self.cwd, 'invert3d')
# Name of file containing current model traveltimes # Name of file containing current model traveltimes
self.mtrav = 'mtimes.dat' self.mtrav = 'mtimes.dat'
# Name of file containing reference model traveltimes # Name of file containing reference model traveltimes
@ -99,7 +106,7 @@ class Tomo3d(object):
# Name of file containing initial source locations # Name of file containing initial source locations
self.isl = 'sourcesref.in' self.isl = 'sourcesref.in'
# Name of program for calculating traveltime residuals # Name of program for calculating traveltime residuals
self.resid = '{0}/residuals'.format(self.cwd) self.resid = os.path.join(self.cwd, 'residuals')
# Name of output file for calculating traveltime residuals # Name of output file for calculating traveltime residuals
self.resout = 'residuals.dat' self.resout = 'residuals.dat'