small changes for synthetic tests
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c72ed1e169
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@ -6,16 +6,23 @@ import datetime
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import numpy as np
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class Tomo3d(object):
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def __init__(self, fmtomodir, simuldir = 'fmtomo_simulation', citer = 0, overwrite = False):
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def __init__(self, fmtomodir, simuldir = 'fmtomo_simulation', citer = 0, overwrite = False, buildObs = True):
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'''
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Class build from FMTOMO script tomo3d. Can be used to run several instances of FMM code in parallel.
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:param: citer, current iteration (default = 0: start new model)
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:type: integer
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:param: fmtomodir, directory containing a clean FMTOMO installation (v. 1.0)
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:type: string (path)
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:param: simuldir, simulation directory (must contain FMTOMO input grid files)
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:type: string (path)
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'''
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self.simuldir = simuldir
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self.setCWD()
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self.buildFmtomodir(fmtomodir)
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if buildObs:
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self.buildObsdata()
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self.defParas()
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self.copyRef()
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@ -87,7 +94,7 @@ class Tomo3d(object):
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Initiates inversion parameters for FMTOMO.
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'''
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# Name of program for performing inversion
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self.inv = '{0}/invert3d'.format(self.cwd)
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self.inv = os.path.join(self.cwd, 'invert3d')
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# Name of file containing current model traveltimes
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self.mtrav = 'mtimes.dat'
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# Name of file containing reference model traveltimes
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@ -99,7 +106,7 @@ class Tomo3d(object):
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# Name of file containing initial source locations
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self.isl = 'sourcesref.in'
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# Name of program for calculating traveltime residuals
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self.resid = '{0}/residuals'.format(self.cwd)
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self.resid = os.path.join(self.cwd, 'residuals')
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# Name of output file for calculating traveltime residuals
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self.resout = 'residuals.dat'
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