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small changes for synthetic tests

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This commit is contained in:
Marcel Paffrath 2016-08-15 13:35:01 +02:00
parent c72ed1e169
commit 5228657a60
1 changed files with 11 additions and 4 deletions
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15
pylot/core/active/fmtomoUtils.py
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@ -6,17 +6,24 @@ import datetime
import numpy as np
class Tomo3d(object):
def __init__(self, fmtomodir, simuldir = 'fmtomo_simulation', citer = 0, overwrite = False):
def __init__(self, fmtomodir, simuldir = 'fmtomo_simulation', citer = 0, overwrite = False, buildObs = True):
'''
Class build from FMTOMO script tomo3d. Can be used to run several instances of FMM code in parallel.
:param: citer, current iteration (default = 0: start new model)
:type: integer
:param: fmtomodir, directory containing a clean FMTOMO installation (v. 1.0)
:type: string (path)
:param: simuldir, simulation directory (must contain FMTOMO input grid files)
:type: string (path)
'''
self.simuldir = simuldir
self.setCWD()
self.buildFmtomodir(fmtomodir)
self.buildObsdata()
if buildObs:
self.buildObsdata()
self.defParas()
self.copyRef()
self.citer = citer # current iteration
@ -87,7 +94,7 @@ class Tomo3d(object):
Initiates inversion parameters for FMTOMO.
'''
# Name of program for performing inversion
self.inv = '{0}/invert3d'.format(self.cwd)
self.inv = os.path.join(self.cwd, 'invert3d')
# Name of file containing current model traveltimes
self.mtrav = 'mtimes.dat'
# Name of file containing reference model traveltimes
@ -99,7 +106,7 @@ class Tomo3d(object):
# Name of file containing initial source locations
self.isl = 'sourcesref.in'
# Name of program for calculating traveltime residuals
self.resid = '{0}/residuals'.format(self.cwd)
self.resid = os.path.join(self.cwd, 'residuals')
# Name of output file for calculating traveltime residuals
self.resout = 'residuals.dat'