From 5648fc1870075a20fa33261fed912af637c71572 Mon Sep 17 00:00:00 2001
From: Darius Arnold <Darius.Arnold@ruhr-uni-bochum.de>
Date: Thu, 24 Aug 2017 15:42:12 +0200
Subject: [PATCH] [change] replace NaN's in HOScf by first NaN value instead of
 zero

---
 pylot/core/pick/charfuns.py | 8 +++++---
 1 file changed, 5 insertions(+), 3 deletions(-)

diff --git a/pylot/core/pick/charfuns.py b/pylot/core/pick/charfuns.py
index 9d91c704..7cf16708 100644
--- a/pylot/core/pick/charfuns.py
+++ b/pylot/core/pick/charfuns.py
@@ -296,9 +296,11 @@ class HOScf(CharacteristicFunction):
             elif self.getOrder() == 4:
                 LTA[j] = lta / np.power(lta1, 2)
 
-        nn = np.isnan(LTA)
-        if len(nn) > 1:
-            LTA[nn] = 0
+        # remove NaN's with first not-NaN-value,
+        # so autopicker doesnt pick discontinuity at start of the trace
+        ind = np.where(~np.isnan(LTA))[0]
+        first = ind[0]
+        LTA[:first] = LTA[first]
         self.cf = LTA
         self.xcf = x