Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop

Conflicts:
	pylot/core/read/data.py
This commit is contained in:
Sebastian Wehling-Benatelli 2015-08-27 15:42:01 +02:00
commit 779b9e7313
4 changed files with 94 additions and 32 deletions

0
autoPyLoT.py Normal file → Executable file
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@ -10,7 +10,6 @@ EVENT_DATA/LOCAL #datapath# %data path
2013.02_Insheim #database# %name of data base
e0019.048.13 #eventID# %event ID for single event processing
/DATA/Insheim/STAT_INFO #invdir# %full path to inventory or dataless-seed file
0.5 0.9 190.0 195.0 #prefilt# %corner frequencies for pre-filtering traces before restitution
PILOT #datastructure# %choose data structure
0 #iplot# %flag for plotting: 0 none, 1, partly, >1 everything
AUTOPHASES_AIC_HOS4_ARH #phasefile# %name of autoPILOT output phase file

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@ -163,7 +163,7 @@ def autopickstation(wfstream, pickparam):
if Ldiff < 0:
print 'autopickstation: Cutting times are too large for actual ' \
'waveform!'
print 'Use entire waveform instead!'
print 'Using entire waveform instead!'
pstart = 0
pstop = len(zdat[0].data) * zdat[0].stats.delta
cuttimes = [pstart, pstop]
@ -200,7 +200,7 @@ def autopickstation(wfstream, pickparam):
# both horizontal traces needed
if len(ndat) == 0 or len(edat) == 0:
print 'One or more horizontal components missing!'
print 'Skip control function checkZ4S.'
print 'Skipping control function checkZ4S.'
else:
# filter and taper horizontal traces
trH1_filt = edat.copy()
@ -297,14 +297,14 @@ def autopickstation(wfstream, pickparam):
Sflag = 1
else:
print 'Bad initial (AIC) P-pick, skip this onset!'
print 'Bad initial (AIC) P-pick, skipping this onset!'
print 'AIC-SNR=', aicpick.getSNR(), 'AIC-Slope=', aicpick.getSlope(), 'counts/s'
print '(min. AIC-SNR=', minAICPSNR, ', min. AIC-Slope=', minAICPslope, 'counts/s)'
Sflag = 0
else:
print 'autopickstation: No vertical component data availabler!, ' \
'Skip station!'
print 'autopickstation: No vertical component data available!, ' \
'Skipping station!'
if edat is not None and ndat is not None and len(edat) > 0 and len(
ndat) > 0 and Pweight < 4:
@ -503,7 +503,7 @@ def autopickstation(wfstream, pickparam):
Sweight, SNRS, SNRSdB)
else:
print 'Bad initial (AIC) S-pick, skip this onset!'
print 'Bad initial (AIC) S-pick, skipping this onset!'
print 'AIC-SNR=', aicarhpick.getSNR(), \
'AIC-Slope=', aicarhpick.getSlope(), 'counts/s'
print '(min. AIC-SNR=', minAICSSNR, ', min. AIC-Slope=', \

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@ -1,7 +1,6 @@
#!/usr/bin/env python
# -*- coding: utf-8 -*-
import pdb
import os
import glob
import matplotlib.pyplot as plt
@ -146,53 +145,117 @@ class Data(object):
self.wfdata = self.getOriginalWFData().copy()
self.dirty = False
def resetPicks(self):
def resetPicks(self):
self.getEvtData().picks = []
def restituteWFData(self, invdlpath, prefilt):
st = self.getWFData()
def restituteWFData(self, invdlpath, streams=None):
if streams == None:
st = self.getWFData()
else:
st = streams
for tr in st:
if tr.stats.station[3] == '_': # this is for some ugly station naming
# remove underscores
if tr.stats.station[3] == '_':
tr.stats.station = tr.stats.station[0:3]
dlp = '%s/*.dataless' % invdlpath
invp = '%s/*.inv' % invdlpath
dlp = '%s/*.dless' % invdlpath
invp = '%s/*.xml' % invdlpath
respp = '%s/*.resp' % invdlpath
dlfile = glob.glob(dlp)
invfile = glob.glob(invp)
respfile = glob.glob(respp)
# check for dataless-SEED file
if len(dlfile) >= 1:
print "Found dataless-SEED file!"
print "Found dataless-SEED file(s)!"
print "Reading meta data information ..."
print dlfile[0]
parser = Parser('%s' % dlfile[0])
for j in range(len(dlfile)):
print "Found dataless-SEED file %s" % dlfile[j]
parser = Parser('%s' % dlfile[j])
for i in range(len(st)):
# check, whether this trace has already been corrected
try:
st[i].stats.processing
except:
try:
print "Correcting %s, %s for instrument response ..." \
% (st[i].stats.station, st[i].stats.channel)
# get corner frequencies for pre-filtering
fny = st[i].stats.sampling_rate / 2
fc21 = fny - (fny * 0.05)
fc22 = fny - (fny * 0.02)
prefilt = [0.5, 0.9, fc21, fc22]
# instrument correction
st[i].simulate(pre_filt=prefilt, seedresp={'filename': parser, \
'date': st[i].stats.starttime, 'units': "VEL"})
except ValueError, e:
vmsg = '{0}'.format(e)
print vmsg
else:
print "Trace has already been corrected!"
# check for inventory-xml file
if len(invfile) >= 1:
print "Found inventory-xml file(s)!"
print "Reading meta data information ..."
for j in range(len(invfile)):
print "Found inventory-xml file %s" % invfile[j]
inv = read_inventory(invfile[j], format="STATIONXML")
for i in range(len(st)):
# check, whether this trace has already been corrected
try:
st[i].stats.processing
except:
try:
print "Correcting for instrument response ..."
st.simulate(pre_filt=prefilt, seedresp={'filename': parser, \
'date': st[0].stats.starttime, 'units': "VEL"})
print "Correcting %s, %s for instrument response ..." \
% (st[i].stats.station, st[i].stats.channel)
# get corner frequencies for pre-filtering
fny = st[i].stats.sampling_rate / 2
fc21 = fny - (fny * 0.05)
fc22 = fny - (fny * 0.02)
prefilt = [0.5, 0.9, fc21, fc22]
# instrument correction
st[i].attach_response(inv)
st[i].remove_response(output='VEL', pre_filt=prefilt)
except ValueError, e:
vmsg = '{0}'.format(e)
print vmsg
elif len(invfile) >= 1:
print "Found inventory-xml file!"
else:
print "Trace has already been corrected!"
# check for RESP-file
if len(respfile) >= 1:
print "Found response file(s)!"
print "Reading meta data information ..."
inv = read_inventory(invfile, format="STATIONXML")
print "Applying instrument correction ..."
st.attach_response(inv)
st.remove_response(output='VEL', pre_filt=prefilt)
elif len(respfile) >= 1:
print "Found response file!"
print respfile
for j in range(len(respfile)):
print "Found RESP-file %s" % respfile[j]
for i in range(len(st)):
# check, whether this trace has already been corrected
try:
st[i].stats.processing
except:
try:
print "Correcting %s, %s for instrument response ..." \
% (st[i].stats.station, st[i].stats.channel)
# get corner frequencies for pre-filtering
fny = st[i].stats.sampling_rate / 2
fc21 = fny - (fny * 0.05)
fc22 = fny - (fny * 0.02)
prefilt = [0.5, 0.9, fc21, fc22]
# instrument correction
seedresp={'filename': respfile[0], 'date': st[0].stats.starttime, \
'units': "VEL"}
st.simulate(paz_remove=None, pre_filt=prefilt, seedresp=seedresp)
st[i].simulate(paz_remove=None, pre_filt=prefilt, seedresp=seedresp)
except ValueError, e:
vmsg = '{0}'.format(e)
print vmsg
else:
print "Trace has already been corrected!"
if len(respfile) < 1 and len(invfile) < 1 and len(dlfile) < 1:
print "No dataless-SEED file,inventory-xml file nor RESP-file found!"
print "Go on processing data without source parameter determination!"
return st
def getEvtData(self):
return self.evtdata