marcel/pylot
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[edit] implemented loop over PILOT database for reassessment

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additionally the output of reassess_pilot_event is more verbose now
This commit is contained in:
Sebastian Wehling-Benatelli 2016-05-10 09:54:21 +02:00
parent 3705eb567b
commit c7d7acd7e3
2 changed files with 17 additions and 3 deletions
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16
pylot/core/io/phases.py
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@ -267,7 +267,16 @@ def picks_from_picksdict(picks):
return picks_list return picks_list
def reassess_pilot_event(root_dir, event_id, fn_param=None): def reassess_pilot_db(root_dir, out_dir=None, fn_param=None):
import glob
evt_list = glob.glob1(root_dir,'e????.???.??')
for evt in evt_list:
reassess_pilot_event(root_dir, evt, out_dir, fn_param)
def reassess_pilot_event(root_dir, event_id, out_dir=None, fn_param=None):
from obspy import read from obspy import read
from pylot.core.io.inputs import AutoPickParameter from pylot.core.io.inputs import AutoPickParameter
@ -283,7 +292,9 @@ def reassess_pilot_event(root_dir, event_id, fn_param=None):
phases_file = glob.glob(os.path.join(search_base, 'PHASES.mat')) phases_file = glob.glob(os.path.join(search_base, 'PHASES.mat'))
if not phases_file: if not phases_file:
return return
print('Opening PILOT phases file: {fn}'.format(fn=phases_file[0]))
picks_dict = picks_from_pilot(phases_file[0]) picks_dict = picks_from_pilot(phases_file[0])
print('Dictionary read from PHASES.mat:\n{0}'.format(picks_dict))
for station in picks_dict.keys(): for station in picks_dict.keys():
fn_pattern = os.path.join(search_base, '{0}*'.format(station)) fn_pattern = os.path.join(search_base, '{0}*'.format(station))
try: try:
@ -320,7 +331,10 @@ def reassess_pilot_event(root_dir, event_id, fn_param=None):
evt = ope.Event(resource_id=event_id) evt = ope.Event(resource_id=event_id)
evt.picks = picks_from_picksdict(picks_dict) evt.picks = picks_from_picksdict(picks_dict)
# write phase information to file # write phase information to file
if not out_dir:
fnout_prefix = os.path.join(root_dir, event_id, '{0}.'.format(event_id)) fnout_prefix = os.path.join(root_dir, event_id, '{0}.'.format(event_id))
else:
fnout_prefix = os.path.join(out_dir, event_id, '{0}.'.format(event_id))
evt.write(fnout_prefix + 'xml', format='QUAKEML') evt.write(fnout_prefix + 'xml', format='QUAKEML')
#evt.write(fnout_prefix + 'cnv', format='VELEST') #evt.write(fnout_prefix + 'cnv', format='VELEST')

2
scripts/pylot-reasses-pilot-event.py
View File

@ -21,4 +21,4 @@ if __name__ == '__main__':
) )
args = parser.parse_args() args = parser.parse_args()
reassess_pilot_event(args.dir, args.id) reassess_pilot_event(args.dir, args.id, None)