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WALL-E --- Small robot, big job! Restructuring the code and preparing implementation of a re-assessment tool for PILOT phases.

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This commit is contained in:
Sebastian Wehling-Benatelli
2016-05-01 21:10:30 +02:00
parent 72fa9e8feb
commit edd8920d54
16 changed files with 431 additions and 380 deletions
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4
pylot/core/pick/autopick.py
View File

@@ -11,14 +11,14 @@ function conglomerate utils.
import matplotlib.pyplot as plt
import numpy as np
from pylot.core.read.inputs import AutoPickParameter
from pylot.core.io.inputs import AutoPickParameter
from pylot.core.pick.picker import AICPicker, PragPicker
from pylot.core.pick.charfuns import CharacteristicFunction
from pylot.core.pick.charfuns import HOScf, AICcf, ARZcf, ARHcf, AR3Ccf
from pylot.core.pick.utils import checksignallength, checkZ4S, earllatepicker, \
getSNR, fmpicker, checkPonsets, wadaticheck
from pylot.core.util.utils import getPatternLine
from pylot.core.read.data import Data
from pylot.core.io.data import Data
from pylot.core.analysis.magnitude import WApp

8
pylot/core/pick/compare.py
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@@ -9,7 +9,7 @@ import matplotlib.pyplot as plt
from obspy import read_events
from pylot.core.read.io import picks_from_evt
from pylot.core.io.phases import picks_from_evt
from pylot.core.util.pdf import ProbabilityDensityFunction
from pylot.core.util.version import get_git_version as _getVersionString
@@ -251,9 +251,3 @@ class PDFDictionary(object):
return pdf_picks
#comp_obj = Comparison(manual='/home/sebastianp/Data/Insheim/e0019.048.13.xml',
# auto='/data/Geothermie/Insheim/EVENT_DATA/LOCAL/RefDB/e0019.048.13/autoPyLoT.xml')
#comp_obj.plot()
#comp_obj.hist_expectation()
#comp_obj.hist_standard_deviation()

163
pylot/core/pick/utils.py
View File

@@ -9,11 +9,12 @@
:author: Ludger Kueperkoch / MAGS2 EP3 working group
"""
import numpy as np
import matplotlib.pyplot as plt
from obspy.core import Stream, UTCDateTime
import warnings
import matplotlib.pyplot as plt
import numpy as np
from obspy.core import Stream, UTCDateTime
def earllatepicker(X, nfac, TSNR, Pick1, iplot=None, stealthMode=False):
'''
@@ -937,162 +938,6 @@ def checkZ4S(X, pick, zfac, checkwin, iplot):
return returnflag
def writephases(arrivals, fformat, filename):
'''
Function of methods to write phases to the following standard file
formats used for locating earthquakes:
HYPO71, NLLoc, VELEST, HYPOSAT, and hypoDD
:param: arrivals
:type: dictionary containing all phase information including
station ID, phase, first motion, weight (uncertainty),
....
:param: fformat
:type: string, chosen file format (location routine),
choose between NLLoc, HYPO71, HYPOSAT, VELEST,
HYPOINVERSE, and hypoDD
:param: filename, full path and name of phase file
:type: string
'''
if fformat == 'NLLoc':
print ("Writing phases to %s for NLLoc" % filename)
fid = open("%s" % filename, 'w')
# write header
fid.write('# EQEVENT: Label: EQ001 Loc: X 0.00 Y 0.00 Z 10.00 OT 0.00 \n')
for key in arrivals:
# P onsets
if arrivals[key]['P']:
fm = arrivals[key]['P']['fm']
if fm == None:
fm = '?'
onset = arrivals[key]['P']['mpp']
year = onset.year
month = onset.month
day = onset.day
hh = onset.hour
mm = onset.minute
ss = onset.second
ms = onset.microsecond
ss_ms = ss + ms / 1000000.0
if arrivals[key]['P']['weight'] < 4:
pweight = 1 # use pick
else:
pweight = 0 # do not use pick
fid.write('%s ? ? ? P %s %d%02d%02d %02d%02d %7.4f GAU 0 0 0 0 %d \n' % (key,
fm,
year,
month,
day,
hh,
mm,
ss_ms,
pweight))
# S onsets
if arrivals[key]['S']:
fm = '?'
onset = arrivals[key]['S']['mpp']
year = onset.year
month = onset.month
day = onset.day
hh = onset.hour
mm = onset.minute
ss = onset.second
ms = onset.microsecond
ss_ms = ss + ms / 1000000.0
if arrivals[key]['S']['weight'] < 4:
sweight = 1 # use pick
else:
sweight = 0 # do not use pick
fid.write('%s ? ? ? S %s %d%02d%02d %02d%02d %7.4f GAU 0 0 0 0 %d \n' % (key,
fm,
year,
month,
day,
hh,
mm,
ss_ms,
sweight))
fid.close()
elif fformat == 'HYPO71':
print ("Writing phases to %s for HYPO71" % filename)
fid = open("%s" % filename, 'w')
# write header
fid.write(' EQ001\n')
for key in arrivals:
if arrivals[key]['P']['weight'] < 4:
Ponset = arrivals[key]['P']['mpp']
Sonset = arrivals[key]['S']['mpp']
pweight = arrivals[key]['P']['weight']
sweight = arrivals[key]['S']['weight']
fm = arrivals[key]['P']['fm']
if fm is None:
fm = '-'
Ao = arrivals[key]['S']['Ao']
if Ao is None:
Ao = ''
else:
Ao = str('%7.2f' % Ao)
year = Ponset.year
if year >= 2000:
year = year - 2000
else:
year = year - 1900
month = Ponset.month
day = Ponset.day
hh = Ponset.hour
mm = Ponset.minute
ss = Ponset.second
ms = Ponset.microsecond
ss_ms = ss + ms / 1000000.0
if pweight < 2:
pstr = 'I'
elif pweight >= 2:
pstr = 'E'
if arrivals[key]['S']['weight'] < 4:
Sss = Sonset.second
Sms = Sonset.microsecond
Sss_ms = Sss + Sms / 1000000.0
Sss_ms = str('%5.02f' % Sss_ms)
if sweight < 2:
sstr = 'I'
elif sweight >= 2:
sstr = 'E'
fid.write('%s%sP%s%d %02d%02d%02d%02d%02d%5.2f %s%sS %d %s\n' % (key,
pstr,
fm,
pweight,
year,
month,
day,
hh,
mm,
ss_ms,
Sss_ms,
sstr,
sweight,
Ao))
else:
fid.write('%s%sP%s%d %02d%02d%02d%02d%02d%5.2f %s\n' % (key,
pstr,
fm,
pweight,
year,
month,
day,
hh,
mm,
ss_ms,
Ao))
fid.close()
if __name__ == '__main__':
import doctest