WIP: Simplify data structure #39
@ -21,25 +21,6 @@ from pylot.core.util.utils import get_owner, full_range, four_digits, transformF
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backtransformFilterString, loopIdentifyPhase, identifyPhase
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def add_amplitudes(event, amplitudes):
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amplitude_list = []
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for pick in event.picks:
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try:
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a0 = amplitudes[pick.waveform_id.station_code]
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amplitude = ope.Amplitude(generic_amplitude=a0 * 1e-3)
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amplitude.unit = 'm'
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amplitude.category = 'point'
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amplitude.waveform_id = pick.waveform_id
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amplitude.magnitude_hint = 'ML'
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amplitude.pick_id = pick.resource_id
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amplitude.type = 'AML'
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amplitude_list.append(amplitude)
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except KeyError:
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continue
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event.amplitudes = amplitude_list
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return event
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def readPILOTEvent(phasfn=None, locfn=None, authority_id='RUB', **kwargs):
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"""
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readPILOTEvent - function
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@ -193,31 +174,6 @@ def convert_pilot_times(time_array):
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return UTCDateTime(*times)
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def picksdict_from_obs(fn):
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"""
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create pick dictionary from obs file
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:param fn: filename
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:type fn:
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:return:
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:rtype:
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"""
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picks = dict()
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station_name = str()
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for line in open(fn, 'r'):
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if line.startswith('#'):
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continue
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else:
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phase_line = line.split()
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if not station_name == phase_line[0]:
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phase = dict()
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station_name = phase_line[0]
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phase_name = phase_line[4].upper()
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pick = UTCDateTime(phase_line[6] + phase_line[7] + phase_line[8])
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phase[phase_name] = dict(mpp=pick, fm=phase_line[5])
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picks[station_name] = phase
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return picks
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def picksdict_from_picks(evt, parameter=None):
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"""
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Takes an Event object and return the pick dictionary commonly used within
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@ -373,636 +329,149 @@ def picks_from_picksdict(picks, creation_info=None):
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return picks_list
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def reassess_pilot_db(root_dir, db_dir, out_dir=None, fn_param=None, verbosity=0):
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# TODO: change root to datapath
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db_root = os.path.join(root_dir, db_dir)
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evt_list = glob.glob1(db_root, 'e????.???.??')
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for evt in evt_list:
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if verbosity > 0:
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print('Reassessing event {0}'.format(evt))
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reassess_pilot_event(root_dir, db_dir, evt, out_dir, fn_param, verbosity)
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def reassess_pilot_event(root_dir, db_dir, event_id, out_dir=None, fn_param=None, verbosity=0):
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from obspy import read
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from pylot.core.io.inputs import PylotParameter
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from pylot.core.pick.utils import earllatepicker
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# TODO: change root to datapath
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default = PylotParameter(fn_param, verbosity)
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search_base = os.path.join(root_dir, db_dir, event_id)
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phases_file = glob.glob(os.path.join(search_base, 'PHASES.mat'))
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if not phases_file:
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return
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if verbosity > 1:
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print('Opening PILOT phases file: {fn}'.format(fn=phases_file[0]))
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picks_dict = picksdict_from_pilot(phases_file[0])
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if verbosity > 0:
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print('Dictionary read from PHASES.mat:\n{0}'.format(picks_dict))
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datacheck = list()
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info = None
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for station in picks_dict.keys():
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fn_pattern = os.path.join(search_base, '{0}*'.format(station))
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try:
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st = read(fn_pattern)
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except TypeError as e:
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if 'Unknown format for file' in e.message:
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try:
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st = read(fn_pattern, format='GSE2')
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except ValueError as e:
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if e.message == 'second must be in 0..59':
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info = 'A known Error was raised. Please find the list of corrupted files and double-check these files.'
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datacheck.append(fn_pattern + ' (time info)\n')
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continue
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else:
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raise ValueError(e.message)
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except Exception as e:
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if 'No file matching file pattern:' in e.message:
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if verbosity > 0:
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warnings.warn('no waveform data found for station {station}'.format(station=station),
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RuntimeWarning)
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datacheck.append(fn_pattern + ' (no data)\n')
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continue
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else:
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raise e
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else:
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raise e
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for phase in picks_dict[station].keys():
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try:
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mpp = picks_dict[station][phase]['mpp']
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except KeyError as e:
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print(e.message, station)
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continue
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sel_st = select_for_phase(st, phase)
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if not sel_st:
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msg = 'no waveform data found for station {station}'.format(station=station)
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warnings.warn(msg, RuntimeWarning)
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continue
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stime, etime = full_range(sel_st)
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rel_pick = mpp - stime
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epp, lpp, spe = earllatepicker(sel_st,
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default.get('nfac{0}'.format(phase)),
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default.get('tsnrz' if phase == 'P' else 'tsnrh'),
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Pick1=rel_pick,
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iplot=0,
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verbosity=0)
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if epp is None or lpp is None:
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continue
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epp = stime + epp
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lpp = stime + lpp
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min_diff = 3 * st[0].stats.delta
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if lpp - mpp < min_diff:
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lpp = mpp + min_diff
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if mpp - epp < min_diff:
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epp = mpp - min_diff
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picks_dict[station][phase] = dict(epp=epp, mpp=mpp, lpp=lpp, spe=spe)
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if datacheck:
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if info:
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if verbosity > 0:
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print(info + ': {0}'.format(search_base))
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fncheck = open(os.path.join(search_base, 'datacheck_list'), 'w')
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fncheck.writelines(datacheck)
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fncheck.close()
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del datacheck
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# create Event object for export
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evt = ope.Event(resource_id=event_id)
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evt.picks = picks_from_picksdict(picks_dict)
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# write phase information to file
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if not out_dir:
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fnout_prefix = os.path.join(root_dir, db_dir, event_id, 'PyLoT_{0}.'.format(event_id))
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else:
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out_dir = os.path.join(out_dir, db_dir)
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if not os.path.isdir(out_dir):
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os.makedirs(out_dir)
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fnout_prefix = os.path.join(out_dir, 'PyLoT_{0}.'.format(event_id))
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evt.write(fnout_prefix + 'xml', format='QUAKEML')
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def writephases(arrivals, fformat, filename, parameter=None, eventinfo=None):
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"""
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Function of methods to write phases to the following standard file
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formats used for locating earthquakes:
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Writes earthquake phase data to different file formats.
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HYPO71, NLLoc, VELEST, HYPOSAT, FOCMEC, and hypoDD
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:param arrivals:dictionary containing all phase information including
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station ID, phase, first motion, weight (uncertainty), ...
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:param arrivals: Dictionary containing phase information (station ID, phase, first motion, weight, etc.)
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:type arrivals: dict
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:param fformat: chosen file format (location routine),
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choose between NLLoc, HYPO71, HYPOSAT, VELEST,
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HYPOINVERSE, FOCMEC, and hypoDD
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:param fformat: File format to write to (e.g., 'NLLoc', 'HYPO71', 'HYPOSAT', 'VELEST', 'HYPODD', 'FOCMEC')
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:type fformat: str
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:param filename: full path and name of phase file
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:type filename: string
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:param parameter: all input information
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:type parameter: object
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:param eventinfo: optional, needed for VELEST-cnv file
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and FOCMEC- and HASH-input files
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:type eventinfo: `obspy.core.event.Event` object
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:param filename: Path and name of the output phase file
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:type filename: str
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:param parameter: Additional parameters for writing the phase data
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:type parameter: object
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:param eventinfo: Event information needed for specific formats like VELEST, FOCMEC, and HASH
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:type eventinfo: obspy.core.event.Event
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"""
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if fformat == 'NLLoc':
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print("Writing phases to %s for NLLoc" % filename)
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fid = open("%s" % filename, 'w')
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# write header
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fid.write('# EQEVENT: %s Label: EQ%s Loc: X 0.00 Y 0.00 Z 10.00 OT 0.00 \n' %
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(parameter.get('database'), parameter.get('eventID')))
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arrivals = chooseArrivals(arrivals) # MP MP what is chooseArrivals? It is not defined anywhere
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for key in arrivals:
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# P onsets
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if 'P' in arrivals[key]:
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try:
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fm = arrivals[key]['P']['fm']
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except KeyError as e:
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print(e)
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fm = None
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if fm is None:
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fm = '?'
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onset = arrivals[key]['P']['mpp']
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year = onset.year
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month = onset.month
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day = onset.day
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hh = onset.hour
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mm = onset.minute
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ss = onset.second
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ms = onset.microsecond
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ss_ms = ss + ms / 1000000.0
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pweight = 1 # use pick
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try:
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if arrivals[key]['P']['weight'] >= 4:
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pweight = 0 # do not use pick
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print("Station {}: Uncertain pick, do not use it!".format(key))
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except KeyError as e:
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print(e.message + '; no weight set during processing')
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fid.write('%s ? ? ? P %s %d%02d%02d %02d%02d %7.4f GAU 0 0 0 0 %d \n' % (key,
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fm,
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year,
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month,
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day,
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hh,
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mm,
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ss_ms,
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pweight))
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# S onsets
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if 'S' in arrivals[key] and arrivals[key]['S']['mpp'] is not None:
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fm = '?'
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onset = arrivals[key]['S']['mpp']
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year = onset.year
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month = onset.month
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day = onset.day
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hh = onset.hour
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mm = onset.minute
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ss = onset.second
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ms = onset.microsecond
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ss_ms = ss + ms / 1000000.0
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sweight = 1 # use pick
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try:
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if arrivals[key]['S']['weight'] >= 4:
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sweight = 0 # do not use pick
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except KeyError as e:
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print(str(e) + '; no weight set during processing')
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Ao = arrivals[key]['S']['Ao'] # peak-to-peak amplitude
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if Ao == None:
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Ao = 0.0
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# fid.write('%s ? ? ? S %s %d%02d%02d %02d%02d %7.4f GAU 0 0 0 0 %d \n' % (key,
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fid.write('%s ? ? ? S %s %d%02d%02d %02d%02d %7.4f GAU 0 %9.2f 0 0 %d \n' % (key,
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fm,
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year,
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month,
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day,
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hh,
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mm,
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ss_ms,
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Ao,
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sweight))
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fid.close()
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elif fformat == 'HYPO71':
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print("Writing phases to %s for HYPO71" % filename)
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fid = open("%s" % filename, 'w')
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# write header
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fid.write(' %s\n' %
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parameter.get('eventID'))
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arrivals = chooseArrivals(arrivals) # MP MP what is chooseArrivals? It is not defined anywhere
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for key in arrivals:
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if arrivals[key]['P']['weight'] < 4:
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stat = key
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if len(stat) > 4: # HYPO71 handles only 4-string station IDs
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stat = stat[1:5]
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Ponset = arrivals[key]['P']['mpp']
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Sonset = arrivals[key]['S']['mpp']
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pweight = arrivals[key]['P']['weight']
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sweight = arrivals[key]['S']['weight']
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fm = arrivals[key]['P']['fm']
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if fm is None:
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fm = '-'
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Ao = arrivals[key]['S']['Ao']
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if Ao is None:
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Ao = ''
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else:
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Ao = str('%7.2f' % Ao)
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year = Ponset.year
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if year >= 2000:
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year = year - 2000
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else:
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year = year - 1900
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month = Ponset.month
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day = Ponset.day
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hh = Ponset.hour
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mm = Ponset.minute
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ss = Ponset.second
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ms = Ponset.microsecond
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ss_ms = ss + ms / 1000000.0
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if pweight < 2:
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pstr = 'I'
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elif pweight >= 2:
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pstr = 'E'
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if arrivals[key]['S']['weight'] < 4:
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Sss = Sonset.second
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Sms = Sonset.microsecond
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Sss_ms = Sss + Sms / 1000000.0
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Sss_ms = str('%5.02f' % Sss_ms)
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if sweight < 2:
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sstr = 'I'
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elif sweight >= 2:
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sstr = 'E'
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fid.write('%-4s%sP%s%d %02d%02d%02d%02d%02d%5.2f %s%sS %d %s\n' % (stat,
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pstr,
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fm,
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pweight,
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year,
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month,
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day,
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hh,
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mm,
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ss_ms,
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Sss_ms,
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sstr,
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sweight,
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Ao))
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else:
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fid.write('%-4s%sP%s%d %02d%02d%02d%02d%02d%5.2f %s\n' % (stat,
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pstr,
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fm,
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pweight,
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year,
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month,
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day,
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hh,
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mm,
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ss_ms,
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Ao))
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def write_nlloc():
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with open(filename, 'w') as fid:
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fid.write('# EQEVENT: {} Label: EQ{} Loc: X 0.00 Y 0.00 Z 10.00 OT 0.00 \n'.format(
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parameter.get('database'), parameter.get('eventID')))
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for key, value in arrivals.items():
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for phase in ['P', 'S']:
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if phase in value:
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fm = value[phase].get('fm', '?')
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onset = value[phase]['mpp']
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ss_ms = onset.second + onset.microsecond / 1000000.0
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weight = 1 if value[phase].get('weight', 0) < 4 else 0
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amp = value[phase].get('Ao', 0.0) if phase == 'S' else ''
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fid.write('{} ? ? ? {} {}{}{} {}{} {:7.4f} GAU 0 {} 0 0 {}\n'.format(
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key, phase, fm, onset.year, onset.month, onset.day, onset.hour, onset.minute, ss_ms, amp,
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weight))
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fid.close()
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def write_hypo71():
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with open(filename, 'w') as fid:
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fid.write(
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' {}\n'.format(parameter.get('eventID')))
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for key, value in arrivals.items():
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if value['P'].get('weight', 0) < 4:
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stat = key[:4]
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Ponset = value['P']['mpp']
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Sonset = value.get('S', {}).get('mpp')
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pweight = value['P'].get('weight', 0)
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sweight = value.get('S', {}).get('weight', 0)
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fm = value['P'].get('fm', '-')
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Ao = value.get('S', {}).get('Ao', '')
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year = Ponset.year - 2000 if Ponset.year >= 2000 else Ponset.year - 1900
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ss_ms = Ponset.second + Ponset.microsecond / 1000000.0
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if Sonset:
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Sss_ms = Sonset.second + Sonset.microsecond / 1000000.0
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fid.write('{}P{}{}{} {}{}{}{}{} {:5.2f} {}{}S {} {}\n'.format(
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stat, 'I' if pweight < 2 else 'E', fm, pweight, year, Ponset.month, Ponset.day,
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Ponset.hour, Ponset.minute, ss_ms, Sss_ms, 'I' if sweight < 2 else 'E', sweight, Ao))
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else:
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fid.write('{}P{}{}{} {}{}{}{}{} {:5.2f} {}\n'.format(
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stat, 'I' if pweight < 2 else 'E', fm, pweight, year, Ponset.month, Ponset.day,
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Ponset.hour, Ponset.minute, ss_ms, Ao))
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elif fformat == 'HYPOSAT':
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print("Writing phases to %s for HYPOSAT" % filename)
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fid = open("%s" % filename, 'w')
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# write header
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||||
fid.write('%s, event %s \n' % (parameter.get('database'), parameter.get('eventID')))
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arrivals = chooseArrivals(arrivals) # MP MP what is chooseArrivals? It is not defined anywhere
|
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for key in arrivals:
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# P onsets
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if 'P' in arrivals[key] and arrivals[key]['P']['mpp'] is not None:
|
||||
if arrivals[key]['P']['weight'] < 4:
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Ponset = arrivals[key]['P']['mpp']
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pyear = Ponset.year
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pmonth = Ponset.month
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pday = Ponset.day
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phh = Ponset.hour
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pmm = Ponset.minute
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pss = Ponset.second
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pms = Ponset.microsecond
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Pss = pss + pms / 1000000.0
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# use symmetrized picking error as std
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||||
# (read the HYPOSAT manual)
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pstd = arrivals[key]['P']['spe']
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||||
if pstd is None:
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||||
errorsP = parameter.get('timeerrorsP')
|
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if arrivals[key]['P']['weight'] == 0:
|
||||
pstd = errorsP[0]
|
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elif arrivals[key]['P']['weight'] == 1:
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||||
pstd = errorsP[1]
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elif arrivals[key]['P']['weight'] == 2:
|
||||
pstd = errorsP[2]
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elif arrivals[key]['P']['weight'] == 3:
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psrd = errorsP[3]
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else:
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pstd = errorsP[4]
|
||||
fid.write('%-5s P1 %4.0f %02d %02d %02d %02d %05.02f %5.3f -999. 0.00 -999. 0.00\n'
|
||||
% (key, pyear, pmonth, pday, phh, pmm, Pss, pstd))
|
||||
# S onsets
|
||||
if 'S' in arrivals[key] and arrivals[key]['S']['mpp'] is not None:
|
||||
if arrivals[key]['S']['weight'] < 4:
|
||||
Sonset = arrivals[key]['S']['mpp']
|
||||
syear = Sonset.year
|
||||
smonth = Sonset.month
|
||||
sday = Sonset.day
|
||||
shh = Sonset.hour
|
||||
smm = Sonset.minute
|
||||
sss = Sonset.second
|
||||
sms = Sonset.microsecond
|
||||
Sss = sss + sms / 1000000.0
|
||||
sstd = arrivals[key]['S']['spe']
|
||||
if pstd is None:
|
||||
errorsS = parameter.get('timeerrorsS')
|
||||
if arrivals[key]['S']['weight'] == 0:
|
||||
pstd = errorsS[0]
|
||||
elif arrivals[key]['S']['weight'] == 1:
|
||||
pstd = errorsS[1]
|
||||
elif arrivals[key]['S']['weight'] == 2:
|
||||
pstd = errorsS[2]
|
||||
elif arrivals[key]['S']['weight'] == 3:
|
||||
psrd = errorsS[3]
|
||||
else:
|
||||
pstd = errorsP[4]
|
||||
fid.write('%-5s S1 %4.0f %02d %02d %02d %02d %05.02f %5.3f -999. 0.00 -999. 0.00\n'
|
||||
% (key, syear, smonth, sday, shh, smm, Sss, sstd))
|
||||
fid.close()
|
||||
def write_hyposat():
|
||||
with open(filename, 'w') as fid:
|
||||
fid.write('{}, event {} \n'.format(parameter.get('database'), parameter.get('eventID')))
|
||||
for key, value in arrivals.items():
|
||||
for phase in ['P', 'S']:
|
||||
if phase in value and value[phase].get('weight', 0) < 4:
|
||||
onset = value[phase]['mpp']
|
||||
ss_ms = onset.second + onset.microsecond / 1000000.0
|
||||
std = value[phase].get('spe', parameter.get('timeerrorsP')[value[phase].get('weight', 0)])
|
||||
fid.write(
|
||||
'{:<5} {}1 {:4} {:02} {:02} {:02} {:02} {:05.02f} {:5.3f} -999. 0.00 -999. 0.00\n'.format(
|
||||
key, phase, onset.year, onset.month, onset.day, onset.hour, onset.minute, ss_ms, std))
|
||||
|
||||
elif fformat == 'VELEST':
|
||||
print("Writing phases to %s for VELEST" % filename)
|
||||
fid = open("%s" % filename, 'w')
|
||||
# get informations needed in cnv-file
|
||||
# check, whether latitude is N or S and longitude is E or W
|
||||
try:
|
||||
eventsource = eventinfo.origins[0]
|
||||
except:
|
||||
def write_velest():
|
||||
if not eventinfo:
|
||||
print("No source origin calculated yet, thus no cnv-file creation possible!")
|
||||
return
|
||||
if eventsource['latitude'] < 0:
|
||||
cns = 'S'
|
||||
else:
|
||||
cns = 'N'
|
||||
if eventsource['longitude'] < 0:
|
||||
cew = 'W'
|
||||
else:
|
||||
cew = 'E'
|
||||
# get last two integers of origin year
|
||||
stime = eventsource['time']
|
||||
if stime.year - 2000 >= 0:
|
||||
syear = stime.year - 2000
|
||||
else:
|
||||
syear = stime.year - 1900
|
||||
ifx = 0 # default value, see VELEST manual, pp. 22-23
|
||||
# write header
|
||||
fid.write('%s%02d%02d %02d%02d %05.2f %7.4f%c %8.4f%c %7.2f %6.2f %02.0f 0.0 0.03 1.0 1.0\n' % (
|
||||
syear, stime.month, stime.day, stime.hour, stime.minute, stime.second, eventsource['latitude'],
|
||||
cns, eventsource['longitude'], cew, eventsource['depth'], eventinfo.magnitudes[0]['mag'], ifx))
|
||||
n = 0
|
||||
# check whether arrivals are dictionaries (autoPyLoT) or pick object (PyLoT)
|
||||
if isinstance(arrivals, dict) == False:
|
||||
# convert pick object (PyLoT) into dictionary
|
||||
evt = ope.Event(resource_id=eventinfo['resource_id'])
|
||||
evt.picks = arrivals
|
||||
arrivals = picksdict_from_picks(evt)
|
||||
# check for automatic and manual picks
|
||||
# prefer manual picks
|
||||
usedarrivals = chooseArrivals(arrivals)
|
||||
for key in usedarrivals:
|
||||
# P onsets
|
||||
if 'P' in usedarrivals[key]:
|
||||
if usedarrivals[key]['P']['weight'] < 4:
|
||||
n += 1
|
||||
stat = key
|
||||
if len(stat) > 4: # VELEST handles only 4-string station IDs
|
||||
stat = stat[1:5]
|
||||
Ponset = usedarrivals[key]['P']['mpp']
|
||||
Pweight = usedarrivals[key]['P']['weight']
|
||||
Prt = Ponset - stime # onset time relative to source time
|
||||
if n % 6 != 0:
|
||||
fid.write('%-4sP%d%6.2f' % (stat, Pweight, Prt))
|
||||
else:
|
||||
fid.write('%-4sP%d%6.2f\n' % (stat, Pweight, Prt))
|
||||
# S onsets
|
||||
if 'S' in usedarrivals[key]:
|
||||
if usedarrivals[key]['S']['weight'] < 4:
|
||||
n += 1
|
||||
stat = key
|
||||
if len(stat) > 4: # VELEST handles only 4-string station IDs
|
||||
stat = stat[1:5]
|
||||
Sonset = usedarrivals[key]['S']['mpp']
|
||||
Sweight = usedarrivals[key]['S']['weight']
|
||||
Srt = Ponset - stime # onset time relative to source time
|
||||
if n % 6 != 0:
|
||||
fid.write('%-4sS%d%6.2f' % (stat, Sweight, Srt))
|
||||
else:
|
||||
fid.write('%-4sS%d%6.2f\n' % (stat, Sweight, Srt))
|
||||
fid.close()
|
||||
with open(filename, 'w') as fid:
|
||||
origin = eventinfo.origins[0]
|
||||
lat_dir = 'S' if origin.latitude < 0 else 'N'
|
||||
lon_dir = 'W' if origin.longitude < 0 else 'E'
|
||||
year = origin.time.year - 2000 if origin.time.year >= 2000 else origin.time.year - 1900
|
||||
fid.write(
|
||||
'{}{}{} {}{} {} {:05.2f} {:7.4f}{} {:8.4f}{} {:7.2f} {:6.2f} {:02.0f} 0.0 0.03 1.0 1.0\n'.format(
|
||||
year, origin.time.month, origin.time.day, origin.time.hour, origin.time.minute, origin.time.second,
|
||||
origin.latitude, lat_dir, origin.longitude, lon_dir, origin.depth, eventinfo.magnitudes[0].mag, 0))
|
||||
for key, value in arrivals.items():
|
||||
for phase in ['P', 'S']:
|
||||
if phase in value and value[phase].get('weight', 0) < 4:
|
||||
onset = value[phase]['mpp']
|
||||
rt = (onset - origin.time).total_seconds()
|
||||
fid.write('{:<4}{}{}{:6.2f}\n'.format(key[:4], phase, value[phase].get('weight', 0), rt))
|
||||
|
||||
elif fformat == 'HYPODD':
|
||||
print("Writing phases to %s for hypoDD" % filename)
|
||||
fid = open("%s" % filename, 'w')
|
||||
# get event information needed for hypoDD-phase file
|
||||
try:
|
||||
eventsource = eventinfo.origins[0]
|
||||
except:
|
||||
def write_hypodd():
|
||||
if not eventinfo:
|
||||
print("No source origin calculated yet, thus no hypoDD-infile creation possible!")
|
||||
return
|
||||
stime = eventsource['time']
|
||||
try:
|
||||
event = eventinfo['pylot_id']
|
||||
hddID = event.split('.')[0][1:5]
|
||||
except:
|
||||
print("Error 1111111!")
|
||||
hddID = "00000"
|
||||
# write header
|
||||
fid.write('# %d %d %d %d %d %5.2f %7.4f +%6.4f %7.4f %4.2f 0.1 0.5 %4.2f %s\n' % (
|
||||
stime.year, stime.month, stime.day, stime.hour, stime.minute, stime.second,
|
||||
eventsource['latitude'], eventsource['longitude'], eventsource['depth'] / 1000,
|
||||
eventinfo.magnitudes[0]['mag'], eventsource['quality']['standard_error'], hddID))
|
||||
# check whether arrivals are dictionaries (autoPyLoT) or pick object (PyLoT)
|
||||
if isinstance(arrivals, dict) == False:
|
||||
# convert pick object (PyLoT) into dictionary
|
||||
evt = ope.Event(resource_id=eventinfo['resource_id'])
|
||||
evt.picks = arrivals
|
||||
arrivals = picksdict_from_picks(evt)
|
||||
# check for automatic and manual picks
|
||||
# prefer manual picks
|
||||
usedarrivals = chooseArrivals(arrivals)
|
||||
for key in usedarrivals:
|
||||
if 'P' in usedarrivals[key]:
|
||||
# P onsets
|
||||
if usedarrivals[key]['P']['weight'] < 4:
|
||||
Ponset = usedarrivals[key]['P']['mpp']
|
||||
Prt = Ponset - stime # onset time relative to source time
|
||||
fid.write('%s %6.3f 1 P\n' % (key, Prt))
|
||||
if 'S' in usedarrivals[key]:
|
||||
# S onsets
|
||||
if usedarrivals[key]['S']['weight'] < 4:
|
||||
Sonset = usedarrivals[key]['S']['mpp']
|
||||
Srt = Sonset - stime # onset time relative to source time
|
||||
fid.write('%-5s %6.3f 1 S\n' % (key, Srt))
|
||||
with open(filename, 'w') as fid:
|
||||
origin = eventinfo.origins[0]
|
||||
stime = origin.time
|
||||
fid.write('# {} {} {} {} {} {} {:7.4f} +{:6.4f} {:7.4f} {:4.2f} 0.1 0.5 {:4.2f} {}\n'.format(
|
||||
stime.year, stime.month, stime.day, stime.hour, stime.minute, stime.second,
|
||||
origin.latitude, origin.longitude, origin.depth / 1000, eventinfo.magnitudes[0].mag,
|
||||
origin.quality.standard_error, "00000"))
|
||||
for key, value in arrivals.items():
|
||||
for phase in ['P', 'S']:
|
||||
if phase in value and value[phase].get('weight', 0) < 4:
|
||||
onset = value[phase]['mpp']
|
||||
rt = (onset - stime).total_seconds()
|
||||
fid.write('{} {:6.3f} 1 {}\n'.format(key, rt, phase))
|
||||
|
||||
fid.close()
|
||||
|
||||
elif fformat == 'FOCMEC':
|
||||
print("Writing phases to %s for FOCMEC" % filename)
|
||||
fid = open("%s" % filename, 'w')
|
||||
# get event information needed for FOCMEC-input file
|
||||
try:
|
||||
eventsource = eventinfo.origins[0]
|
||||
except:
|
||||
def write_focmec():
|
||||
if not eventinfo:
|
||||
print("No source origin calculated yet, thus no FOCMEC-infile creation possible!")
|
||||
return
|
||||
stime = eventsource['time']
|
||||
|
||||
# avoid printing '*' in focmec-input file
|
||||
if parameter.get('eventid') == '*' or parameter.get('eventid') is None:
|
||||
evID = 'e0000'
|
||||
else:
|
||||
evID = parameter.get('eventid')
|
||||
|
||||
# write header line including event information
|
||||
fid.write('%s %d%02d%02d%02d%02d%02.0f %7.4f %6.4f %3.1f %3.1f\n' % (evID,
|
||||
stime.year, stime.month, stime.day,
|
||||
stime.hour, stime.minute, stime.second,
|
||||
eventsource['latitude'],
|
||||
eventsource['longitude'],
|
||||
eventsource['depth'] / 1000,
|
||||
eventinfo.magnitudes[0]['mag']))
|
||||
picks = eventinfo.picks
|
||||
# check whether arrivals are dictionaries (autoPyLoT) or pick object (PyLoT)
|
||||
if isinstance(arrivals, dict) == False:
|
||||
# convert pick object (PyLoT) into dictionary
|
||||
evt = ope.Event(resource_id=eventinfo['resource_id'])
|
||||
evt.picks = arrivals
|
||||
arrivals = picksdict_from_picks(evt)
|
||||
# check for automatic and manual picks
|
||||
# prefer manual picks
|
||||
usedarrivals = chooseArrivals(arrivals)
|
||||
for key in usedarrivals:
|
||||
if 'P' in usedarrivals[key]:
|
||||
if usedarrivals[key]['P']['weight'] < 4 and usedarrivals[key]['P']['fm'] is not None:
|
||||
stat = key
|
||||
for i in range(len(picks)):
|
||||
station = picks[i].waveform_id.station_code
|
||||
if station == stat:
|
||||
# get resource ID
|
||||
resid_picks = picks[i].get('resource_id')
|
||||
# find same ID in eventinfo
|
||||
# there it is the pick_id!!
|
||||
for j in range(len(eventinfo.origins[0].arrivals)):
|
||||
resid_eventinfo = eventinfo.origins[0].arrivals[j].get('pick_id')
|
||||
if resid_eventinfo == resid_picks and eventinfo.origins[0].arrivals[j].phase == 'P':
|
||||
if len(stat) > 4: # FOCMEC handles only 4-string station IDs
|
||||
stat = stat[1:5]
|
||||
az = eventinfo.origins[0].arrivals[j].get('azimuth')
|
||||
inz = eventinfo.origins[0].arrivals[j].get('takeoff_angle')
|
||||
fid.write('%-4s %6.2f %6.2f%s \n' % (stat,
|
||||
az,
|
||||
inz,
|
||||
usedarrivals[key]['P']['fm']))
|
||||
with open(filename, 'w') as fid:
|
||||
origin = eventinfo.origins[0]
|
||||
stime = origin.time
|
||||
fid.write('{} {}{:02d}{:02d}{:02d}{:02d}{:02.0f} {:7.4f} {:6.4f} {:3.1f} {:3.1f}\n'.format(
|
||||
parameter.get('eventid', 'e0000'), stime.year, stime.month, stime.day, stime.hour, stime.minute,
|
||||
stime.second, origin.latitude, origin.longitude, origin.depth / 1000, eventinfo.magnitudes[0].mag))
|
||||
for key, value in arrivals.items():
|
||||
if 'P' in value and value['P'].get('weight', 0) < 4 and value['P'].get('fm'):
|
||||
for pick in eventinfo.picks:
|
||||
if pick.waveform_id.station_code == key:
|
||||
for arrival in origin.arrivals:
|
||||
if arrival.pick_id == pick.resource_id and arrival.phase == 'P':
|
||||
stat = key[:4]
|
||||
az = arrival.azimuth
|
||||
inz = arrival.takeoff_angle
|
||||
fid.write('{:<4} {:6.2f} {:6.2f}{}\n'.format(stat, az, inz, value['P']['fm']))
|
||||
break
|
||||
|
||||
fid.close()
|
||||
if fformat == 'NLLoc':
|
||||
write_nlloc()
|
||||
elif fformat == 'HYPO71':
|
||||
write_hypo71()
|
||||
elif fformat == 'HYPOSAT':
|
||||
write_hyposat()
|
||||
elif fformat == 'VELEST':
|
||||
write_velest()
|
||||
elif fformat == 'HYPODD':
|
||||
write_hypodd()
|
||||
elif fformat == 'FOCMEC':
|
||||
write_focmec()
|
||||
|
||||
elif fformat == 'HASH':
|
||||
# two different input files for
|
||||
# HASH-driver 1 and 2 (see HASH manual!)
|
||||
filename1 = filename + 'drv1' + '.phase'
|
||||
filename2 = filename + 'drv2' + '.phase'
|
||||
print("Writing phases to %s for HASH for HASH-driver 1" % filename1)
|
||||
fid1 = open("%s" % filename1, 'w')
|
||||
print("Writing phases to %s for HASH for HASH-driver 2" % filename2)
|
||||
fid2 = open("%s" % filename2, 'w')
|
||||
# get event information needed for HASH-input file
|
||||
try:
|
||||
eventsource = eventinfo.origins[0]
|
||||
except:
|
||||
print("No source origin calculated yet, thus no cnv-file creation possible!")
|
||||
return
|
||||
eventsource = eventinfo.origins[0]
|
||||
event = parameter.get('eventID')
|
||||
hashID = event.split('.')[0][1:5]
|
||||
latdeg = eventsource['latitude']
|
||||
latmin = eventsource['latitude'] * 60 / 10000
|
||||
londeg = eventsource['longitude']
|
||||
lonmin = eventsource['longitude'] * 60 / 10000
|
||||
erh = 1 / 2 * (eventsource.origin_uncertainty['min_horizontal_uncertainty'] +
|
||||
eventsource.origin_uncertainty['max_horizontal_uncertainty']) / 1000
|
||||
erz = eventsource.depth_errors['uncertainty']
|
||||
stime = eventsource['time']
|
||||
if stime.year - 2000 >= 0:
|
||||
syear = stime.year - 2000
|
||||
else:
|
||||
syear = stime.year - 1900
|
||||
picks = eventinfo.picks
|
||||
# write header line including event information
|
||||
# for HASH-driver 1
|
||||
fid1.write('%s%02d%02d%02d%02d%5.2f%2dN%5.2f%3dE%5.2f%6.3f%4.2f%5.2f%5.2f%s\n' % (syear,
|
||||
stime.month, stime.day,
|
||||
stime.hour, stime.minute,
|
||||
stime.second,
|
||||
latdeg, latmin, londeg,
|
||||
lonmin, eventsource['depth'],
|
||||
eventinfo.magnitudes[0][
|
||||
'mag'], erh, erz,
|
||||
hashID))
|
||||
# write header line including event information
|
||||
# for HASH-driver 2
|
||||
fid2.write(
|
||||
'%d%02d%02d%02d%02d%5.2f%dN%5.2f%3dE%6.2f%5.2f %d %5.2f %5.2f %4.2f %s \n' % (
|
||||
syear, stime.month, stime.day,
|
||||
stime.hour, stime.minute, stime.second,
|
||||
latdeg, latmin, londeg, lonmin,
|
||||
eventsource['depth'],
|
||||
eventsource['quality']['used_phase_count'],
|
||||
erh, erz, eventinfo.magnitudes[0]['mag'],
|
||||
hashID))
|
||||
# Prefer Manual Picks over automatic ones if possible
|
||||
arrivals = chooseArrivals(arrivals) # MP MP what is chooseArrivals? It is not defined anywhere
|
||||
# write phase lines
|
||||
for key in arrivals:
|
||||
if 'P' in arrivals[key]:
|
||||
if arrivals[key]['P']['weight'] < 4 and arrivals[key]['P']['fm'] is not None:
|
||||
stat = key
|
||||
ccode = arrivals[key]['P']['channel']
|
||||
ncode = arrivals[key]['P']['network']
|
||||
|
||||
if arrivals[key]['P']['weight'] < 2:
|
||||
Pqual = 'I'
|
||||
else:
|
||||
Pqual = 'E'
|
||||
|
||||
for i in range(len(picks)):
|
||||
station = picks[i].waveform_id.station_code
|
||||
if station == stat:
|
||||
# get resource ID
|
||||
resid_picks = picks[i].get('resource_id')
|
||||
# find same ID in eventinfo
|
||||
# there it is the pick_id!!
|
||||
for j in range(len(eventinfo.origins[0].arrivals)):
|
||||
resid_eventinfo = eventinfo.origins[0].arrivals[j].get('pick_id')
|
||||
if resid_eventinfo == resid_picks and eventinfo.origins[0].arrivals[j].phase == 'P':
|
||||
if len(stat) > 4: # HASH handles only 4-string station IDs
|
||||
stat = stat[1:5]
|
||||
az = eventinfo.origins[0].arrivals[j].get('azimuth')
|
||||
inz = eventinfo.origins[0].arrivals[j].get('takeoff_angle')
|
||||
dist = eventinfo.origins[0].arrivals[j].get('distance')
|
||||
# write phase line for HASH-driver 1
|
||||
fid1.write(
|
||||
'%-4s%sP%s%d 0 %3.1f %03d %03d 2 1 %s\n' % (
|
||||
stat, Pqual, arrivals[key]['P']['fm'], arrivals[key]['P']['weight'],
|
||||
dist, inz, az, ccode))
|
||||
# write phase line for HASH-driver 2
|
||||
fid2.write('%-4s %s %s %s %s \n' % (
|
||||
stat,
|
||||
ncode,
|
||||
ccode,
|
||||
Pqual,
|
||||
arrivals[key]['P']['fm']))
|
||||
break
|
||||
|
||||
fid1.write(' %s' % hashID)
|
||||
fid1.close()
|
||||
fid2.close()
|
||||
|
||||
|
||||
def chooseArrivals(arrivals):
|
||||
|
||||
Loading…
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Reference in New Issue
Block a user