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WIP: Simplify data structure #39

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sebastianw wants to merge 31 commits from 38-simplify-data-structure into develop
pull from: 38-simplify-data-structure
merge into: marcel:develop
Conversation 1 Commits 31 Files Changed 25 +66 -225
5 changed files with 66 additions and 225 deletions
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Showing only changes of commit 7fbc3bc5ae - Show all commits

10
autoPyLoT.py
View File

@ -28,7 +28,7 @@ from pylot.core.util.dataprocessing import restitute_data, Metadata
from pylot.core.util.defaults import SEPARATOR from pylot.core.util.defaults import SEPARATOR
from pylot.core.util.event import Event from pylot.core.util.event import Event
from pylot.core.util.structure import DATASTRUCTURE from pylot.core.util.structure import DATASTRUCTURE
from pylot.core.util.utils import get_None, trim_station_components, check4gapsAndRemove, check4doubled, \ from pylot.core.util.utils import get_none, trim_station_components, check4gapsAndRemove, check4doubled, \
check4rotated check4rotated
from pylot.core.util.version import get_git_version as _getVersionString from pylot.core.util.version import get_git_version as _getVersionString
@ -91,9 +91,9 @@ def autoPyLoT(input_dict=None, parameter=None, inputfile=None, fnames=None, even
sp=sp_info) sp=sp_info)
print(splash) print(splash)
parameter = get_None(parameter) parameter = get_none(parameter)
inputfile = get_None(inputfile) inputfile = get_none(inputfile)
eventid = get_None(eventid) eventid = get_none(eventid)
fig_dict = None fig_dict = None
fig_dict_wadatijack = None fig_dict_wadatijack = None
@ -154,7 +154,7 @@ def autoPyLoT(input_dict=None, parameter=None, inputfile=None, fnames=None, even
datastructure.setExpandFields(exf) datastructure.setExpandFields(exf)
# check if default location routine NLLoc is available and all stations are used # check if default location routine NLLoc is available and all stations are used
if get_None(parameter['nllocbin']) and station == 'all': if get_none(parameter['nllocbin']) and station == 'all':
locflag = 1 locflag = 1
# get NLLoc-root path # get NLLoc-root path
nllocroot = parameter.get('nllocroot') nllocroot = parameter.get('nllocroot')

4
pylot/core/pick/autopick.py
View File

@ -22,7 +22,7 @@ from pylot.core.pick.picker import AICPicker, PragPicker
from pylot.core.pick.utils import checksignallength, checkZ4S, earllatepicker, \ from pylot.core.pick.utils import checksignallength, checkZ4S, earllatepicker, \
getSNR, fmpicker, checkPonsets, wadaticheck, get_quality_class, PickingFailedException, MissingTraceException getSNR, fmpicker, checkPonsets, wadaticheck, get_quality_class, PickingFailedException, MissingTraceException
from pylot.core.util.utils import getPatternLine, gen_Pool, \ from pylot.core.util.utils import getPatternLine, gen_Pool, \
get_bool, identifyPhaseID, get_None, correct_iplot get_bool, identifyPhaseID, get_none, correct_iplot
def autopickevent(data, param, iplot=0, fig_dict=None, fig_dict_wadatijack=None, ncores=0, metadata=None, origin=None): def autopickevent(data, param, iplot=0, fig_dict=None, fig_dict_wadatijack=None, ncores=0, metadata=None, origin=None):
@ -258,7 +258,7 @@ class AutopickStation(object):
self.pickparams = copy.deepcopy(pickparam) self.pickparams = copy.deepcopy(pickparam)
self.verbose = verbose self.verbose = verbose
self.iplot = correct_iplot(iplot) self.iplot = correct_iplot(iplot)
self.fig_dict = get_None(fig_dict) self.fig_dict = get_none(fig_dict)
self.metadata = metadata self.metadata = metadata
self.origin = origin self.origin = origin

14
pylot/core/pick/utils.py
View File

@ -15,7 +15,7 @@ import numpy as np
from obspy.core import Stream, UTCDateTime from obspy.core import Stream, UTCDateTime
from scipy.signal import argrelmax from scipy.signal import argrelmax
from pylot.core.util.utils import get_bool, get_None, SetChannelComponents from pylot.core.util.utils import get_bool, get_none, SetChannelComponents
def earllatepicker(X, nfac, TSNR, Pick1, iplot=0, verbosity=1, fig=None, linecolor='k'): def earllatepicker(X, nfac, TSNR, Pick1, iplot=0, verbosity=1, fig=None, linecolor='k'):
@ -136,7 +136,7 @@ def earllatepicker(X, nfac, TSNR, Pick1, iplot=0, verbosity=1, fig=None, linecol
PickError = symmetrize_error(diffti_te, diffti_tl) PickError = symmetrize_error(diffti_te, diffti_tl)
if iplot > 1: if iplot > 1:
if get_None(fig) is None: if get_none(fig) is None:
fig = plt.figure() # iplot) fig = plt.figure() # iplot)
plt_flag = 1 plt_flag = 1
fig._tight = True fig._tight = True
@ -344,7 +344,7 @@ def fmpicker(Xraw, Xfilt, pickwin, Pick, iplot=0, fig=None, linecolor='k'):
print("fmpicker: Found polarity %s" % FM) print("fmpicker: Found polarity %s" % FM)
if iplot > 1: if iplot > 1:
if get_None(fig) is None: if get_none(fig) is None:
fig = plt.figure() # iplot) fig = plt.figure() # iplot)
plt_flag = 1 plt_flag = 1
fig._tight = True fig._tight = True
@ -868,7 +868,7 @@ def checksignallength(X, pick, minsiglength, pickparams, iplot=0, fig=None, line
returnflag = 0 returnflag = 0
if iplot > 1: if iplot > 1:
if get_None(fig) is None: if get_none(fig) is None:
fig = plt.figure() # iplot) fig = plt.figure() # iplot)
plt_flag = 1 plt_flag = 1
fig._tight = True fig._tight = True
@ -1213,14 +1213,14 @@ def checkZ4S(X, pick, pickparams, iplot, fig=None, linecolor='k'):
t = np.linspace(diff_dict[key], trace.stats.endtime - trace.stats.starttime + diff_dict[key], t = np.linspace(diff_dict[key], trace.stats.endtime - trace.stats.starttime + diff_dict[key],
trace.stats.npts) trace.stats.npts)
if i == 0: if i == 0:
if get_None(fig) is None: if get_none(fig) is None:
fig = plt.figure() # self.iplot) ### WHY? MP MP fig = plt.figure() # self.iplot) ### WHY? MP MP
plt_flag = 1 plt_flag = 1
ax1 = fig.add_subplot(3, 1, i + 1) ax1 = fig.add_subplot(3, 1, i + 1)
ax = ax1 ax = ax1
ax.set_title('CheckZ4S, Station %s' % zdat[0].stats.station) ax.set_title('CheckZ4S, Station %s' % zdat[0].stats.station)
else: else:
if get_None(fig) is None: if get_none(fig) is None:
fig = plt.figure() # self.iplot) ### WHY? MP MP fig = plt.figure() # self.iplot) ### WHY? MP MP
plt_flag = 1 plt_flag = 1
ax = fig.add_subplot(3, 1, i + 1, sharex=ax1) ax = fig.add_subplot(3, 1, i + 1, sharex=ax1)
@ -1494,7 +1494,7 @@ def getQualityFromUncertainty(uncertainty, Errors):
# set initial quality to 4 (worst) and change only if one condition is hit # set initial quality to 4 (worst) and change only if one condition is hit
quality = 4 quality = 4
if get_None(uncertainty) is None: if get_none(uncertainty) is None:
return quality return quality
if uncertainty <= Errors[0]: if uncertainty <= Errors[0]:

25
pylot/core/util/utils.py
View File

@ -315,15 +315,32 @@ def fnConstructor(s):
return fn return fn
def get_None(value): def get_none(value):
""" """
Convert "None" to None Convert "None" to None
:param value: :param value:
:type value: str, bool :type value: str, NoneType
:return: :return:
:rtype: bool :rtype: type(value) or NoneType
>>> st = read()
>>> print(get_none(st))
3 Trace(s) in Stream:
BW.RJOB..EHZ | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples
BW.RJOB..EHN | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples
BW.RJOB..EHE | 2009-08-24T00:20:03.000000Z - 2009-08-24T00:20:32.990000Z | 100.0 Hz, 3000 samples
>>> get_none('Stream')
'Stream'
>>> get_none(0)
0
>>> get_none(0.)
0.0
>>> print(get_none('None'))
None
>>> print(get_none(None))
None
""" """
if value == 'None': if value is None or (type(value) is str and value == 'None'):
return None return None
else: else:
return value return value

238
pylot/core/util/widgets.py
View File

@ -53,7 +53,7 @@ from pylot.core.util.utils import prepTimeAxis, full_range, demeanTrace, isSorte
pick_linestyle_plt, pick_color_plt, \ pick_linestyle_plt, pick_color_plt, \
check4rotated, check4doubled, check_for_gaps_and_merge, check_for_nan, identifyPhase, \ check4rotated, check4doubled, check_for_gaps_and_merge, check_for_nan, identifyPhase, \
loopIdentifyPhase, trim_station_components, transformFilteroptions2String, \ loopIdentifyPhase, trim_station_components, transformFilteroptions2String, \
identifyPhaseID, get_bool, get_None, pick_color, getAutoFilteroptions, SetChannelComponents, \ identifyPhaseID, get_bool, get_none, pick_color, getAutoFilteroptions, SetChannelComponents, \
station_id_remove_channel, get_pylot_eventfile_with_extension, get_possible_pylot_eventfile_extensions station_id_remove_channel, get_pylot_eventfile_with_extension, get_possible_pylot_eventfile_extensions
from autoPyLoT import autoPyLoT from autoPyLoT import autoPyLoT
from pylot.core.util.thread import Thread from pylot.core.util.thread import Thread
@ -860,26 +860,13 @@ class WaveformWidgetPG(QtWidgets.QWidget):
def clearPlotDict(self): def clearPlotDict(self):
self.plotdict = dict() self.plotdict = dict()
def plotWFData(self, wfdata, wfsyn=None, title=None, scaleddata=False, mapping=True, def plotWFData(self, wfdata, wfsyn=None, title=None, zoomx=None, zoomy=None,
component='*', nth_sample=1, verbosity=0, method='normal', gain=1., shift_syn=0.2): noiselevel=None, scaleddata=False, mapping=True,
def station_sort(nslc): component='*', nth_sample=1, iniPick=None, verbosity=0,
"""Try to sort after station integer in case of a line array (e.g. active seismics)""" method='normal', gain=1.):
try:
rval = sorted(nslc, key=lambda x: int(x.split('.')[1]))
return rval
except ValueError as e:
# this is the standard case for seismological stations
pass
except Exception as e:
print(f'Sorting by station integer failed with unknown exception: {e}')
# fallback to default sorting
return sorted(nslc)
if not wfdata: if not wfdata:
print('Nothing to plot.') print('Nothing to plot.')
return return
self.title = title self.title = title
self.clearPlotDict() self.clearPlotDict()
self.wfstart, self.wfend = full_range(wfdata) self.wfstart, self.wfend = full_range(wfdata)
@ -897,12 +884,14 @@ class WaveformWidgetPG(QtWidgets.QWidget):
else: else:
st_select = wfdata st_select = wfdata
st_select, gaps = merge_stream(st_select)
# list containing tuples of network, station, channel (for sorting) # list containing tuples of network, station, channel (for sorting)
nslc = [] nslc = []
for trace in st_select: for trace in st_select:
nslc.append( nslc.append(
trace.get_id()) # (trace.stats.network, trace.stats.station, trace.stats.location trace.stats.channel)) trace.get_id()) # (trace.stats.network, trace.stats.station, trace.stats.location trace.stats.channel))
nslc = station_sort(nslc) nslc.sort()
nslc.reverse() nslc.reverse()
plots = [] plots = []
@ -966,7 +955,7 @@ class WaveformWidgetPG(QtWidgets.QWidget):
self.ylabel = '' self.ylabel = ''
self.setXLims([0, self.wfend - self.wfstart]) self.setXLims([0, self.wfend - self.wfstart])
self.setYLims([0.5, nmax + 0.5]) self.setYLims([0.5, nmax + 0.5])
return plots return plots, gaps
def minMax(self, trace, time_ax): def minMax(self, trace, time_ax):
''' '''
@ -988,7 +977,7 @@ class WaveformWidgetPG(QtWidgets.QWidget):
min_ = data.min(axis=1) min_ = data.min(axis=1)
max_ = data.max(axis=1) max_ = data.max(axis=1)
if remaining_samples: if remaining_samples:
extreme_values = np.empty((npixel + 1, 2), dtype=float) extreme_values = np.empty((npixel + 1, 2), dtype=np.float)
extreme_values[:-1, 0] = min_ extreme_values[:-1, 0] = min_
extreme_values[:-1, 1] = max_ extreme_values[:-1, 1] = max_
extreme_values[-1, 0] = \ extreme_values[-1, 0] = \
@ -996,7 +985,7 @@ class WaveformWidgetPG(QtWidgets.QWidget):
extreme_values[-1, 1] = \ extreme_values[-1, 1] = \
trace.data[-remaining_samples:].max() trace.data[-remaining_samples:].max()
else: else:
extreme_values = np.empty((npixel, 2), dtype=float) extreme_values = np.empty((npixel, 2), dtype=np.float)
extreme_values[:, 0] = min_ extreme_values[:, 0] = min_
extreme_values[:, 1] = max_ extreme_values[:, 1] = max_
data = extreme_values.flatten() data = extreme_values.flatten()
@ -1566,114 +1555,6 @@ class PylotCanvas(FigureCanvas):
self.draw() self.draw()
class SearchFileByExtensionDialog(QtWidgets.QDialog):
def __init__(self, parent=None, label='Text: ', default_text='.xml', events=None):
super(SearchFileByExtensionDialog, self).__init__(parent)
self.events = events
self.filepaths = []
self.file_extensions = []
self.default_text = default_text
self.label = label
self.setButtons()
self.setupUi()
self.connectSignals()
self.showPaths()
self.refreshSelectionBox()
self.refresh_timer = QTimer(self)
self.refresh_timer.timeout.connect(self.showPaths)
self.refresh_timer.start(10000)
self.resize(800, 450)
def setupUi(self):
self.main_layout = QtWidgets.QVBoxLayout()
self.header_layout = QtWidgets.QHBoxLayout()
#
self.setLayout(self.main_layout)
# widgets inside the dialog
self.textLabel = QtWidgets.QLabel(self.label)
self.comboBox = QtWidgets.QComboBox()
self.comboBox.addItem(self.default_text)
self.comboBox.setEditable(True)
# optional search button, currently disabled. List refreshed when text changes
self.searchButton = QtWidgets.QPushButton('Search')
self.searchButton.setVisible(False)
self.tableWidget = QtWidgets.QTableWidget()
tableWidget = self.tableWidget
tableWidget.setColumnCount(3)
tableWidget.setRowCount(len(self.events))
tableWidget.setHorizontalHeaderLabels(('Event ID', 'Filename', 'Last modified'))
tableWidget.setEditTriggers(tableWidget.NoEditTriggers)
tableWidget.setSortingEnabled(True)
header = tableWidget.horizontalHeader()
header.setSectionResizeMode(QtWidgets.QHeaderView.ResizeToContents)
header.setStretchLastSection(True)
self.statusText = QtWidgets.QLabel()
self.header_layout.addWidget(self.textLabel)
self.header_layout.addWidget(self.comboBox)
self.header_layout.addWidget(self.searchButton)
self.main_layout.addLayout(self.header_layout)
self.main_layout.addWidget(self.tableWidget)
self.main_layout.addWidget(self.statusText)
self.main_layout.addWidget(self._buttonbox)
def showPaths(self):
self.filepaths = []
fext = self.comboBox.currentText()
self.tableWidget.clearContents()
for index, event in enumerate(self.events):
filename = get_pylot_eventfile_with_extension(event, fext)
self.tableWidget.setItem(index, 0, QtWidgets.QTableWidgetItem(f'{event.pylot_id}'))
if filename:
self.filepaths.append(filename)
ts = int(os.path.getmtime(filename))
# create QTableWidgetItems of filepath and last modification time
fname_item = QtWidgets.QTableWidgetItem(f'{os.path.split(filename)[-1]}')
ts_item = QtWidgets.QTableWidgetItem(f'{datetime.datetime.fromtimestamp(ts)}')
self.tableWidget.setItem(index, 1, fname_item)
self.tableWidget.setItem(index, 2, ts_item)
# TODO: Idea -> only refresh if table contents changed. Use selection to load only a subset of files
if len(self.filepaths) > 0:
status_text = f'Found {len(self.filepaths)} eventfiles. Do you want to load them?'
else:
status_text = 'Did not find any files for specified file mask.'
self.statusText.setText(status_text)
def refreshSelectionBox(self):
fext = self.comboBox.currentText()
self.file_extensions = [fext]
for event in self.events:
extensions = get_possible_pylot_eventfile_extensions(event, '*.xml')
for ext in extensions:
if not ext in self.file_extensions:
self.file_extensions.append(ext)
self.comboBox.clear()
for ext in sorted(self.file_extensions):
self.comboBox.addItem(ext)
def setButtons(self):
self._buttonbox = QDialogButtonBox(QDialogButtonBox.Ok |
QDialogButtonBox.Cancel)
def connectSignals(self):
self._buttonbox.accepted.connect(self.accept)
self._buttonbox.rejected.connect(self.reject)
self.comboBox.editTextChanged.connect(self.showPaths)
self.searchButton.clicked.connect(self.showPaths)
class SingleTextLineDialog(QtWidgets.QDialog): class SingleTextLineDialog(QtWidgets.QDialog):
def __init__(self, parent=None, label='Text: ', default_text='.xml'): def __init__(self, parent=None, label='Text: ', default_text='.xml'):
super(SingleTextLineDialog, self).__init__(parent) super(SingleTextLineDialog, self).__init__(parent)
@ -1905,7 +1786,7 @@ class PickDlg(QDialog):
# init expected picks using obspy Taup # init expected picks using obspy Taup
try: try:
if self.metadata and model != "None": if self.metadata and model is not None:
self.model = TauPyModel(model) self.model = TauPyModel(model)
self.get_arrivals() self.get_arrivals()
self.drawArrivals() self.drawArrivals()
@ -2632,9 +2513,7 @@ class PickDlg(QDialog):
data.normalize() data.normalize()
if not data: if not data:
QtWidgets.QMessageBox.warning(self, 'No channel to plot', QtWidgets.QMessageBox.warning(self, 'No channel to plot',
'No channel to plot for phase: {}. ' 'No channel to plot for phase: {}.'.format(phase))
'Make sure to select the correct channels for P and S '
'in the menu in the top panel.'.format(phase))
self.leave_picking_mode() self.leave_picking_mode()
return return
@ -2774,7 +2653,7 @@ class PickDlg(QDialog):
minFMSNR = parameter.get('minFMSNR') minFMSNR = parameter.get('minFMSNR')
quality = get_quality_class(spe, parameter.get('timeerrorsP')) quality = get_quality_class(spe, parameter.get('timeerrorsP'))
if quality <= minFMweight and snr >= minFMSNR: if quality <= minFMweight and snr >= minFMSNR:
FM = fmpicker(self.getWFData().select(channel=channel).copy(), wfdata.copy(), parameter.get('fmpickwin'), FM = fmpicker(self.getWFData().select(channel=channel), wfdata, parameter.get('fmpickwin'),
pick - stime_diff) pick - stime_diff)
# save pick times for actual phase # save pick times for actual phase
@ -3687,9 +3566,8 @@ class TuneAutopicker(QWidget):
# wfdat = remove_underscores(wfdat) # wfdat = remove_underscores(wfdat)
# rotate misaligned stations to ZNE # rotate misaligned stations to ZNE
# check for gaps and doubled channels # check for gaps and doubled channels
wfdat, _ = check_for_gaps_and_merge(wfdat) wfdat, gaps = merge_stream(wfdat)
# check for nans # check4gaps(wfdat)
check_for_nan(wfdat)
check4doubled(wfdat) check4doubled(wfdat)
wfdat = check4rotated(wfdat, self.parent().metadata, verbosity=0) wfdat = check4rotated(wfdat, self.parent().metadata, verbosity=0)
# trim station components to same start value # trim station components to same start value
@ -3733,14 +3611,14 @@ class TuneAutopicker(QWidget):
self.listWidget.scrollToBottom() self.listWidget.scrollToBottom()
def get_current_event(self): def get_current_event(self):
path = self.get_current_event_fp() path = self.eventBox.currentText()
return self.parent().project.getEventFromPath(path) return self.parent().project.getEventFromPath(path)
def get_current_event_name(self): def get_current_event_name(self):
return self.eventBox.currentText().split('/')[-1].rstrip('*') return self.eventBox.currentText().split('/')[-1].split('*')[0]
def get_current_event_fp(self): def get_current_event_fp(self):
return self.eventBox.currentText().rstrip('*') return self.eventBox.currentText().split('*')[0]
def get_current_event_picks(self, station): def get_current_event_picks(self, station):
event = self.get_current_event() event = self.get_current_event()
@ -3844,7 +3722,6 @@ class TuneAutopicker(QWidget):
st = self.data.getWFData() st = self.data.getWFData()
tr = st.select(station=self.get_current_station())[0] tr = st.select(station=self.get_current_station())[0]
starttime = tr.stats.starttime starttime = tr.stats.starttime
# create two lists with figure names and subindices (for subplots) to get the correct axes
p_axes = [ p_axes = [
('mainFig', 0), ('mainFig', 0),
('aicFig', 0), ('aicFig', 0),
@ -4792,8 +4669,8 @@ class InputsTab(PropTab):
self.tstopBox = QSpinBox() self.tstopBox = QSpinBox()
for spinbox in [self.tstartBox, self.tstopBox]: for spinbox in [self.tstartBox, self.tstopBox]:
spinbox.setRange(-99999, 99999) spinbox.setRange(-99999, 99999)
self.tstartBox.setValue(float(settings.value('tstart')) if get_None(settings.value('tstart')) else 0) self.tstartBox.setValue(float(settings.value('tstart')) if get_none(settings.value('tstart')) else 0)
self.tstopBox.setValue(float(settings.value('tstop')) if get_None(settings.value('tstop')) else 1e6) self.tstopBox.setValue(float(settings.value('tstop')) if get_none(settings.value('tstop')) else 1e6)
self.cuttimesLayout.addWidget(self.tstartBox, 10) self.cuttimesLayout.addWidget(self.tstartBox, 10)
self.cuttimesLayout.addWidget(QLabel('[s] and'), 0) self.cuttimesLayout.addWidget(QLabel('[s] and'), 0)
self.cuttimesLayout.addWidget(self.tstopBox, 10) self.cuttimesLayout.addWidget(self.tstopBox, 10)
@ -5786,20 +5663,9 @@ class ChooseWaveFormWindow(QWidget):
def submit(self): def submit(self):
matplotlib.pyplot.close(self.currentSpectro) matplotlib.pyplot.close(self.currentSpectro)
t = self.chooseBoxTraces.currentText() + " " + self.chooseBoxComponent.currentText() t = self.chooseBoxTraces.currentText() + " " + self.chooseBoxComponent.currentText()
self.applyFFT() self.currentSpectro = self.traces[
self.chooseBoxTraces.currentText()[3:]][self.chooseBoxComponent.currentText()].spectrogram(show=False, title=t)
def applyFFT(self, trace): self.currentSpectro.show()
tra = self.traces[self.chooseBoxTraces.currentText()[3:]]['Z']
transformed = abs(np.fft.rfft(tra.data))
print ( transformed )
matplotlib.pyplot.plot ( transformed )
matplotlib.pyplot.show()
def applyFFTs(self, tra):
transformed = abs(np.fft.rfft(tra.data))
print ( transformed )
matplotlib.pyplot.plot ( transformed )
matplotlib.pyplot.show()
def submitN(self): def submitN(self):
matplotlib.pyplot.close(self.currentSpectro) matplotlib.pyplot.close(self.currentSpectro)
@ -5815,6 +5681,13 @@ class ChooseWaveFormWindow(QWidget):
self.chooseBoxTraces.currentText()[3:]]['E'].spectrogram(show=False, title=t) self.chooseBoxTraces.currentText()[3:]]['E'].spectrogram(show=False, title=t)
self.currentSpectro.show() self.currentSpectro.show()
def submitZ(self):
matplotlib.pyplot.close(self.currentSpectro)
t = self.chooseBoxTraces.currentText() + " " + self.chooseBoxComponent.currentText()
self.currentSpectro = self.traces[
self.chooseBoxTraces.currentText()[3:]]['Z'].spectrogram(show=False, title=t)
self.currentSpectro.show()
# Creates a QComboBox and adds all traces provided # Creates a QComboBox and adds all traces provided
def createComboBoxTraces(self): def createComboBoxTraces(self):
if len(self.wFs) <= 0: if len(self.wFs) <= 0:
@ -5841,55 +5714,6 @@ class ChooseWaveFormWindow(QWidget):
pass pass
class SpectrogramTab(QWidget):
def __init__(self, traces, wfdata, parent=None):
super(SpectrogramTab, self).__init__(parent)
self.setupUi()
self.traces = traces
self.wfdata = wfdata
def setupUi(self):
pass
def makeSpecFig(self, direction = 'Z', height = 0, width = 0, parent = None):
i = 0
grams = []
figure, axis = matplotlib.pyplot.subplots(len(self.traces), sharex=True)
start, end = full_range(self.wfdata)
if height != 0 and width != 0:
figure.figsize = (width, height)
figure.set_figwidth = width
figure.set_figheight = height
#figure.tight_layout()
for t in self.traces:
tra = self.traces[t][direction]
#print(start, end)
# Set Title
if i == 0:
if direction == 'Z':
figure.suptitle("section: vertical components")
elif direction == 'E':
figure.suptitle("section: east-west components")
elif direction == 'N':
figure.suptitle("section: north-south components")
axis[i].vlines(0, axis[i].get_ylim()[0], axis[i].get_ylim()[1],
colors='m', linestyles='dashed',
linewidth=2)
grams.append(tra.spectrogram(show=False, axes=axis[i]))
i+=1
#figure.setXLims([0, end - start])
figure.set_tight_layout(True)
fC = FigureCanvas(figure)
return fC
if __name__ == '__main__': if __name__ == '__main__':
import doctest import doctest