add notebook collection from seismo-live.org on ObsPy

activate LFS
This commit is contained in:
Kasper D. Fischer 2024-06-10 11:47:40 +02:00
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*.png filter=lfs diff=lfs merge=lfs -text
*.mseed filter=lfs diff=lfs merge=lfs -text
*.sac filter=lfs diff=lfs merge=lfs -text

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{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"<div style='background-image: url(\"../share/images/header.svg\") ; padding: 0px ; background-size: cover ; border-radius: 5px ; height: 250px'>\n",
" <div style=\"float: right ; margin: 50px ; padding: 20px ; background: rgba(255 , 255 , 255 , 0.7) ; width: 50% ; height: 150px\">\n",
" <div style=\"position: relative ; top: 50% ; transform: translatey(-50%)\">\n",
" <div style=\"font-size: xx-large ; font-weight: 900 ; color: rgba(0 , 0 , 0 , 0.8) ; line-height: 100%\">ObsPy Tutorial</div>\n",
" <div style=\"font-size: large ; padding-top: 20px ; color: rgba(0 , 0 , 0 , 0.5)\">Introduction/Index</div>\n",
" </div>\n",
" </div>\n",
"</div>"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"![](images/obspy_logo_full_524x179px.png)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"These notebooks are an introduction to ObsPy and will take about 2 days to fully complete. Some basic knowledge of scientific Python is assumed."
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Timetable/Contents\n",
"\n",
"1. **[Introduction to File Formats and read/write in ObsPy](01_File_Formats.ipynb)** [45 Minutes] - *[[Solution]](01_File_Formats-with_solutions.ipynb)*\n",
"2. **[Handling Time](02_UTCDateTime.ipynb)** [35 Minutes] - *[[Solution]](02_UTCDateTime-with_solutions.ipynb)*\n",
"3. **[Handling Waveform Data: Stream & Trace Classes](03_waveform_data.ipynb)** [45 Minutes] - *[[Solution]](03_waveform_data-with_solutions.ipynb)*\n",
"4. **[Handling Station Metainformation](04_Station_metainformation.ipynb)** [15 Minutes] - *[[Solution]](04_Station_metainformation-with_solutions.ipynb)*\n",
"5. **[Handling Event Metainformation](05_Event_metadata.ipynb)** [25 Minutes] - *[[Solution]](05_Event_metadata-with_solutions.ipynb)*\n",
"6. **[Retrieving Data from Data Centers](06_FDSN.ipynb)** [30 Minutes] - *[[Solution]](06_FDSN-with_solutions.ipynb)*\n",
"7. **[Basic Downloading/Processing Exercise](07_Basic_Processing_Exercise.ipynb)** [60 - x Minutes] - *[[Solution]](07_Basic_Processing_Exercise-with_solutions.ipynb)*\n",
"8. **[Exercise: Event Detection and Magnitude Estimation in an Aftershock Series](08_Exercise__2008_MtCarmel_Earthquake_and_Aftershock_Series.ipynb)** [open end] - *[[Solution]](08_Exercise__2008_MtCarmel_Earthquake_and_Aftershock_Series-with_solutions.ipynb)*"
]
}
],
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"language": "python",
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{"cells": [{"cell_type": "markdown", "metadata": {}, "source": ["<div style='background-image: url(\"../share/images/header.svg\") ; padding: 0px ; background-size: cover ; border-radius: 5px ; height: 250px'>\n", " <div style=\"float: right ; margin: 50px ; padding: 20px ; background: rgba(255 , 255 , 255 , 0.7) ; width: 50% ; height: 150px\">\n", " <div style=\"position: relative ; top: 50% ; transform: translatey(-50%)\">\n", " <div style=\"font-size: xx-large ; font-weight: 900 ; color: rgba(0 , 0 , 0 , 0.8) ; line-height: 100%\">ObsPy Tutorial</div>\n", " <div style=\"font-size: large ; padding-top: 20px ; color: rgba(0 , 0 , 0 , 0.5)\">Handling Station Metadata</div>\n", " </div>\n", " </div>\n", "</div>"]}, {"cell_type": "markdown", "metadata": {}, "source": ["Seismo-Live: http://seismo-live.org\n", "\n", "##### Authors:\n", "* Lion Krischer ([@krischer](https://github.com/krischer))\n", "* Tobias Megies ([@megies](https://github.com/megies))\n", "---"]}, {"cell_type": "markdown", "metadata": {}, "source": ["![](images/obspy_logo_full_524x179px.png)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["%matplotlib inline\n", "import matplotlib.pyplot as plt\n", "plt.style.use('ggplot')\n", "plt.rcParams['figure.figsize'] = 12, 8"]}, {"cell_type": "markdown", "metadata": {}, "source": ["- for station metadata, the de-facto standard of the future (replacing SEED/RESP) is [FDSN StationXML](http://www.fdsn.org/xml/station/)\n", "- FDSN StationXML files can be read using **`read_inventory()`**"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["from obspy import read_inventory\n", "# real-world StationXML files often deviate from the official schema definition\n", "# therefore file-format autodiscovery sometimes fails and we have to force the file format\n", "inventory = read_inventory(\"./data/station_PFO.xml\", format=\"STATIONXML\")\n", "print(type(inventory))"]}, {"cell_type": "markdown", "metadata": {}, "source": ["- the nested ObsPy Inventory class structure (Inventory/Station/Channel/Response/...) is closely modelled after FDSN StationXML\n", "<img src=\"images/Inventory.svg\" width=90%>"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["!head data/station_BFO.xml"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["print(inventory)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["network = inventory[0]\n", "print(network)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["station = network[0]\n", "print(station)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["channel = station[0]\n", "print(channel)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["print(channel.response)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["from obspy import read\n", "st = read(\"./data/waveform_PFO.mseed\")\n", "print(st)"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["inv = read_inventory(\"./data/station_PFO.xml\", format=\"STATIONXML\")"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["print(st[0].stats)"]}, {"cell_type": "markdown", "metadata": {}, "source": ["- the instrument response can be deconvolved from the waveform data using the convenience method **`Stream.remove_response()`**\n", "- evalresp is used internally to calculate the instrument response"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["st.plot()\n", "st.remove_response(inventory=inv)\n", "st.plot()"]}, {"cell_type": "markdown", "metadata": {}, "source": ["- several options can be used to specify details of the deconvolution (water level, frequency domain prefiltering), output units (velocity/displacement/acceleration), demeaning, tapering and to specify if any response stages should be omitted"]}, {"cell_type": "code", "execution_count": null, "metadata": {}, "outputs": [], "source": ["st = read(\"./data/waveform_PFO.mseed\")\n", "st.remove_response(inventory=inv, water_level=60, pre_filt=(0.01, 0.02, 8, 10), output=\"DISP\")\n", "st.plot()"]}, {"cell_type": "markdown", "metadata": {}, "source": ["- station metadata not present in StationXML yet but in Dataless SEED or RESP files can be used for instrument correction using the `.simulate()` method of Stream/Trace in a similar fashion"]}], "metadata": {"kernelspec": {"display_name": "Python 3", "language": "python", "name": "python3"}}, "nbformat": 4, "nbformat_minor": 2}

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<value>2011-04-07T14:32:43.2900</value>
</time>
<creationInfo>
<author>NEIC</author>
</creationInfo>
<latitude>
<value>38.276</value>
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<originID>smi:service.iris.edu/fdsnws/event/1/query?originid=9535390</originID>
<type>MW</type>
<mag>
<value>7.1</value>
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<creationInfo>
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</event>
<event publicID="smi:service.iris.edu/fdsnws/event/1/query?eventid=3317566">
<type>earthquake</type>
<description xmlns:iris="http://service.iris.edu/fdsnws/event/1/" iris:FEcode="229">
<type>Flinn-Engdahl region</type>
<text>OFF EAST COAST OF HONSHU, JAPAN</text>
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<origin xmlns:iris="http://service.iris.edu/fdsnws/event/1/" publicID="smi:service.iris.edu/fdsnws/event/1/query?originid=9540887" iris:contributor="NEIC PDE-M" iris:catalog="NEIC PDE">
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ObsPy/data/station_BFO.xml Normal file
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<?xml version="1.0" encoding="UTF-8"?>
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<Created>2015-02-20T10:41:48</Created>
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<Longitude>8.3303</Longitude>
<Elevation>589</Elevation>
<Site>
<Name>GRSN Station Black Forest Observatory</Name>
<Country>Germany</Country>
</Site>
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</Response>
</Channel>
</Station>
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<Description>(GSN) Global Seismograph Network (IRIS/IDA)</Description>
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<Longitude>8.3311</Longitude>
<Elevation>589</Elevation>
<Site>
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</Site>
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<Latitude>48.3319</Latitude>
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<ClockDrift>2.5e-06</ClockDrift>
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</Network>
</FDSNStationXML>

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ObsPy/data/station_PFO.xml Normal file
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<?xml version="1.0" encoding="ISO-8859-1"?>
<FDSNStationXML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns="http://www.fdsn.org/xml/station/1" schemaVersion="1.0" xsi:schemaLocation="http://www.fdsn.org/xml/station/1 http://www.fdsn.org/xml/station/fdsn-station-1.0.xsd">
<Source>IRIS-DMC</Source>
<Sender>IRIS-DMC</Sender>
<Module>IRIS WEB SERVICE: fdsnws-station | version: 1.0.11</Module>
<ModuleURI>http://service.iris.edu/fdsnws/station/1/query?network=II&amp;level=response&amp;station=PFO&amp;starttime=2011-03-11T05%3A46%3A13.000000&amp;endtime=2011-03-11T05%3A46%3A33.000000&amp;channel=BHZ</ModuleURI>
<Created>2014-02-17T15:43:45</Created>
<Network code="II" startDate="1986-01-01T00:00:00" endDate="2020-12-12T23:59:59" restrictedStatus="open">
<Description>Global Seismograph Network (GSN - IRIS/IDA)</Description>
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<SelectedNumberStations>1</SelectedNumberStations>
<Station code="PFO" startDate="2006-07-13T00:00:00" endDate="2020-12-31T23:59:59" restrictedStatus="open" alternateNetworkCodes=".EARTHSCOPE,_ANSS,.UNRESTRICTED,_CARIBE-EWS,_GSN-BROADBAND,_US-REF,_GSN,_STS-1,_ANSS-BB,_FDSN,_FDSN-ALL,_US-ALL,_REALTIME">
<Latitude>33.6107</Latitude>
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<Elevation>1280.0</Elevation>
<Site>
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</Site>
<CreationDate>1986-10-24T00:00:00</CreationDate>
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<Channel locationCode="00" startDate="2010-07-30T18:50:00" restrictedStatus="open" endDate="2012-07-02T03:59:59" code="BHZ">
<Comment>
<Value>S/N #119005</Value>
</Comment>
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