[task] further steps to implement pick comparison from QtPyLoT
This commit is contained in:
parent
a1d29a45cb
commit
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176
QtPyLoT.py
176
QtPyLoT.py
@ -23,11 +23,10 @@ https://www.iconfinder.com/iconsets/flavour
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(http://www.gnu.org/copyleft/lesser.html)
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"""
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import matplotlib
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import os
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import sys
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import matplotlib
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matplotlib.use('Qt4Agg')
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matplotlib.rcParams['backend.qt4'] = 'PySide'
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@ -45,12 +44,12 @@ from pylot.core.io.inputs import FilterOptions, AutoPickParameter
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from pylot.core.pick.autopick import autopickevent
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from pylot.core.io.phases import picksdict_from_picks
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from pylot.core.loc.nll import locate as locateNll
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from pylot.core.util.defaults import FILTERDEFAULTS, COMPNAME_MAP,\
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from pylot.core.util.defaults import FILTERDEFAULTS, COMPNAME_MAP, \
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AUTOMATIC_DEFAULTS
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from pylot.core.util.errors import FormatError, DatastructureError, \
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OverwriteError
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from pylot.core.util.connection import checkurl
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from pylot.core.util.utils import fnConstructor, createEvent, getLogin, \
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from pylot.core.util.utils import fnConstructor, getLogin, \
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getGlobalTimes
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from pylot.core.io.location import create_creation_info, create_event
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from pylot.core.util.widgets import FilterOptionsDialog, NewEventDlg, \
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@ -81,8 +80,8 @@ class MainWindow(QMainWindow):
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"Enter authority name (e.g. BUG):",
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"Authority")
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settings.setValue("agency_id", agency)
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self.recentEvents = settings.value("data/recentEvents", [])
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self.fname = None
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self.recentfiles = settings.value("data/recentEvents", [])
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self.fname = dict(manual=None, auto=None, loc=None)
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self.fnames = None
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structure_setting = settings.value("data/Structure", "PILOT")
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self.dataStructure = DATASTRUCTURE[structure_setting]()
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@ -104,7 +103,7 @@ class MainWindow(QMainWindow):
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self.setupUi()
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# initialize event data
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if self.recentEvents:
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if self.recentfiles:
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lastEvent = self.getLastEvent()
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self.data = Data(self, lastEvent)
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else:
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@ -112,7 +111,7 @@ class MainWindow(QMainWindow):
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# load and display waveform data
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self.dirty = False
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self.loadData()
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self.load_data()
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if self.loadWaveformData():
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self.updateFilterOptions()
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else:
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@ -149,7 +148,10 @@ class MainWindow(QMainWindow):
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lambda event: self.tutorUser())
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_layout.addWidget(self.DataPlot)
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openIcon = self.style().standardIcon(QStyle.SP_DirOpenIcon)
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manupicksicon = self.style().standardIcon(QStyle.SP_DialogYesButton)
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autopicksicon = self.style().standardIcon(QStyle.SP_DialogNoButton)
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locactionicon = self.style().standardIcon(QStyle.SP_DirOpenIcon)
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loadpiloticon = self.style().standardIcon(QStyle.SP_ComputerIcon)
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quitIcon = self.style().standardIcon(QStyle.SP_MediaStop)
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saveIcon = self.style().standardIcon(QStyle.SP_DriveHDIcon)
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helpIcon = self.style().standardIcon(QStyle.SP_DialogHelpButton)
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@ -179,18 +181,40 @@ class MainWindow(QMainWindow):
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self.createNewEvent,
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QKeySequence.New, newIcon,
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"Create a new event.")
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openEventAction = self.createAction(self, "&Open event ...",
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self.loadData, QKeySequence.Open,
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openIcon, "Open an event.")
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openEventAction.setData(None)
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openmanualpicksaction = self.createAction(self, "Load &picks ...",
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self.load_data,
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QKeySequence.Open,
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manupicksicon,
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"Load pick data for "
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"the actual event.")
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openmanualpicksaction.setData(None)
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openautopicksaction = self.createAction(self, "Load &automatic picks "
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"...",
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self.load_autopicks,
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"Ctrl+A",
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autopicksicon,
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"Load automatic pick data "
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"for the actual event.")
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openautopicksaction.setData(None)
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loadlocationaction = self.createAction(self, "Load &location ...",
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self.load_loc, "Ctrl+L",
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locactionicon,
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"Load location information on "
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"the actual event.")
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loadpilotevent = self.createAction(self, "Load PILOT &event ...",
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self.load_pilot, "Ctrl+E",
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loadpiloticon,
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"Load PILOT event from information "
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"Matlab binary collections.")
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saveEventAction = self.createAction(self, "&Save event ...",
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self.saveData, QKeySequence.Save,
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saveIcon, "Save actual event data.")
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openWFDataAction = self.createAction(self, "Open &waveforms ...",
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self.loadWaveformData,
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"Ctrl+W", QIcon(":/wfIcon.png"),
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"""Open waveform data (event will
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be closed).""")
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"Open waveform data (event will "
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"be closed)")
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prefsEventAction = self.createAction(self, "Preferences",
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self.PyLoTprefs,
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QKeySequence.Preferences,
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@ -228,7 +252,7 @@ class MainWindow(QMainWindow):
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homepage (internet connection available),
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or shipped documentation files.""")
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self.fileMenu = self.menuBar().addMenu('&File')
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self.fileMenuActions = (newEventAction, openEventAction,
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self.fileMenuActions = (newEventAction, openmanualpicksaction,
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saveEventAction, openWFDataAction, None,
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prefsEventAction, quitAction)
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self.fileMenu.aboutToShow.connect(self.updateFileMenu)
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@ -245,7 +269,9 @@ class MainWindow(QMainWindow):
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self.addActions(self.helpMenu, helpActions)
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fileToolBar = self.addToolBar("FileTools")
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fileToolActions = (newEventAction, openEventAction, saveEventAction)
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fileToolActions = (newEventAction, openmanualpicksaction,
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openautopicksaction, loadlocationaction,
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loadpilotevent, saveEventAction)
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fileToolBar.setObjectName("FileTools")
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self.addActions(fileToolBar, fileToolActions)
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@ -299,9 +325,11 @@ class MainWindow(QMainWindow):
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# self.addActions(pickToolBar, pickToolActions)
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locateEvent = self.createAction(parent=self, text='locateEvent',
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slot=self.locateEvent, shortcut='Alt+Ctrl+L',
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icon=locate_icon, tip='Locate the event using '
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'the picked arrivals.')
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slot=self.locateEvent,
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shortcut='Alt+Ctrl+L',
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icon=locate_icon,
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tip='Locate the event using '
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'the picked arrivals.')
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locationToolBar = self.addToolBar("LocationTools")
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locationToolActions = (locateEvent,)
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@ -333,12 +361,12 @@ class MainWindow(QMainWindow):
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except AttributeError:
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current = None
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recentEvents = []
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for eventID in self.recentEvents:
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for eventID in self.recentfiles:
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fname = fnConstructor(eventID)
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if eventID != current and QFile.exists(fname):
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recentEvents.append(eventID)
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recentEvents.reverse()
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self.recentEvents = recentEvents[0:5]
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self.recentfiles = recentEvents[0:5]
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settings = QSettings()
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settings.setValue()
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if recentEvents:
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@ -350,7 +378,7 @@ class MainWindow(QMainWindow):
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self)
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action.setData(fname)
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self.connect(action, Signal("triggered()"),
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self.loadData)
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self.load_data)
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self.fileMenu.addAction(action)
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self.fileMenu.addSeparator()
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self.fileMenu.addAction(self.fileMenuActions[-1])
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@ -359,34 +387,49 @@ class MainWindow(QMainWindow):
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settings = QSettings()
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return settings.value("data/dataRoot")
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def loadAutoPicks(self):
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self.loadData(type='auto')
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def load_autopicks(self, fname=None):
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self.load_data(fname, type='auto')
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def loadData(self, fname=None, type='manual'):
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def load_loc(self, fname=None):
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self.load_data(fname, type='loc')
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def load_pilotevent(self):
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filt = "PILOT location files (*.mat)"
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caption = "Select PILOT loaction file"
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fn_loc = QFileDialog().getOpenFileName(self, caption=caption,
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filter=filt)
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filt = "PILOT phases files (*.mat)"
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caption = "Select PILOT phases file"
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fn_phases = QFileDialog().getOpenFileName(self, caption=caption,
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filter=filt)
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type = QInputDialog().getItem(self, self.tr("Select phases type"),
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self.tr("Type:"), [self.tr("manual"),
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self.tr("automatic")])
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if type.startswith('auto'):
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type = 'auto'
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fname_dict = dict(phasfn=fn_phases, locfn=fn_loc)
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self.load_data(fname_dict, type=type)
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def load_data(self, fname=None, type='manual'):
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if not self.okToContinue():
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return
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if fname is None:
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action = self.sender()
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if isinstance(action, QAction):
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if action.data() is None:
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filt = "Supported event formats (*.mat *.qml *.xml *.kor *.evt)"
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caption = "Open an event file"
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fname = QFileDialog().getOpenFileName(self,
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caption=caption,
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filter=filt)
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fname = fname[0]
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else:
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fname = str(action.data().toString())
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self.setFileName(fname)
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self.data += Data(self, evtdata=self.getFileName())
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self.updatePicks(type=type)
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fname = self.filename_from_action(action)
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self.set_fname(fname, type)
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self.data += Data(self, evtdata=fname)
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if 'loc' not in type:
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self.updatePicks(type=type)
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self.drawPicks()
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def getLastEvent(self):
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return self.recentEvents[0]
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return self.recentfiles[0]
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def addRecentEvent(self, event):
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self.recentEvents.insert(0, event)
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def add_recentfile(self, event):
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self.recentfiles.insert(0, event)
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def getWFFnames(self):
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try:
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@ -422,27 +465,44 @@ class MainWindow(QMainWindow):
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else:
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return
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def getFileName(self):
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def filename_from_action(self, action):
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if action.data() is None:
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filt = "Supported file formats" \
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" (*.mat *.qml *.xml *.kor *.evt)"
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caption = "Open an event file"
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fname = QFileDialog().getOpenFileName(self,
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caption=caption,
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filter=filt)
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fname = fname[0]
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else:
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fname = str(action.data().toString())
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return fname
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def get_fnames(self):
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return self.fname
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def setFileName(self, fname):
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if self.getFileName() is not None:
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self.addRecentEvent(self.getFileName())
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self.fname = fname
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def set_fname(self, fname, type):
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if self.get_fnames()[type] is not None:
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self.add_recentfile(self.get_fnames())
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self.fname[type] = fname
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def getEventFileName(self):
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if self.getFileName() is None:
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self.setFileName(self.getData().getEventFileName())
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return self.getFileName()
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if self.get_fnames() is None:
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self.set_fname(self.getData().getEventFileName())
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return self.get_fnames()
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def saveData(self):
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def getSavePath(e):
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print('warning: {0}'.format(e))
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directory = os.path.join(self.getRoot(), self.getEventFileName())
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file_filter = "QuakeML file (*.xml);;VELEST observation file format (*.cnv);;NonLinLoc observation file (*.obs)"
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fname, selected_filter = QFileDialog.getSaveFileName(self, 'Save event data ...',
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directory, file_filter)
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file_filter = "QuakeML file (*.xml);;VELEST observation file " \
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"format (*.cnv);;NonLinLoc observation file (*.obs)"
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title = 'Save event data ...'
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fname, selected_filter = QFileDialog.getSaveFileName(self,
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title,
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directory,
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file_filter)
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fbasename, exform = os.path.splitext(fname)
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@ -459,7 +519,8 @@ class MainWindow(QMainWindow):
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except OverwriteError:
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msgBox = QMessageBox()
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msgBox.setText("Picks have been modified!")
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msgBox.setInformativeText("Do you want to save the changes and overwrite the picks?")
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msgBox.setInformativeText(
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"Do you want to save the changes and overwrite the picks?")
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msgBox.setDetailedText(self.getData().getPicksStr())
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msgBox.setStandardButtons(QMessageBox.Save | QMessageBox.Cancel)
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msgBox.setDefaultButton(QMessageBox.Save)
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@ -689,7 +750,8 @@ class MainWindow(QMainWindow):
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self.setDirty(True)
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self.logDockWidget = QDockWidget("AutoPickLog", self)
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self.logDockWidget.setObjectName("LogDockWidget")
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self.logDockWidget.setAllowedAreas(Qt.LeftDockWidgetArea | Qt.RightDockWidgetArea)
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self.logDockWidget.setAllowedAreas(
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Qt.LeftDockWidgetArea | Qt.RightDockWidgetArea)
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self.logDockWidget.setWidget(self.listWidget)
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self.addDockWidget(Qt.LeftDockWidgetArea, self.logDockWidget)
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self.addListItem('loading default values for local data ...')
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@ -754,8 +816,10 @@ class MainWindow(QMainWindow):
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plotID = self.getStationID(station)
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ax = self.getPlotWidget().axes
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ylims = np.array([-.5, +.5]) + plotID
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phase_col = {'P': ('c', 'c--', 'b-', 'bv', 'b^'),
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'S': ('m', 'm--', 'r-', 'rv', 'r^')}
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phase_col = {
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'P': ('c', 'c--', 'b-', 'bv', 'b^'),
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'S': ('m', 'm--', 'r-', 'rv', 'r^')
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}
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stat_picks = self.getPicks(type=picktype)[station]
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@ -1,17 +1,17 @@
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#!/usr/bin/env python
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# -*- coding: utf-8 -*-
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import os
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import glob
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from obspy.io.xseed import Parser
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from obspy.core import read, Stream, UTCDateTime
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import os
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from obspy import read_events, read_inventory
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from obspy.core.event import Event, ResourceIdentifier, Pick, WaveformStreamID
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from obspy.core import read, Stream, UTCDateTime
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from obspy.core.event import Event
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from obspy.io.xseed import Parser
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from pylot.core.io.phases import readPILOTEvent, picks_from_picksdict
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from pylot.core.util.utils import fnConstructor, getGlobalTimes
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from pylot.core.io.phases import readPILOTEvent, picks_from_picksdict, \
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picks_from_pilot
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from pylot.core.util.errors import FormatError, OverwriteError
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from pylot.core.util.utils import fnConstructor, getGlobalTimes
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class Data(object):
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@ -36,17 +36,36 @@ class Data(object):
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self.wfdata = Stream()
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self._new = False
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if isinstance(evtdata, Event):
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self.evtdata = evtdata
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pass
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elif isinstance(evtdata, dict):
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evt = readPILOTEvent(**evtdata)
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self.evtdata = evt
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elif evtdata:
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cat = read_events(evtdata)
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self.evtdata = cat[0]
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evtdata = evt
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elif isinstance(evtdata, str):
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try:
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cat = read_events(evtdata)
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if len(cat) is not 1:
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raise ValueError('ambiguous event information for file: '
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'{file}'.format(file=evtdata))
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evtdata = cat[0]
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except TypeError as e:
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if 'Unknown format for file' in e.message:
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if 'PHASES' in evtdata:
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picks = picks_from_pilot(evtdata)
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evtdata = Event()
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evtdata.picks = picks_from_picksdict(picks)
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elif 'LOC' in evtdata:
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raise NotImplementedError('PILOT location information '
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'read support not yet '
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'implemeted.')
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else:
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raise e
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else:
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raise e
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else: # create an empty Event object
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self.setNew()
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self.evtdata = Event()
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self.getEvtData().picks = []
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evtdata = Event()
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evtdata.picks = []
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self.evtdata = evtdata
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self.wforiginal = None
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self.cuttimes = None
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self.dirty = False
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@ -11,10 +11,10 @@ from obspy.core import UTCDateTime
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from pylot.core.io.location import create_arrival, create_event, \
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create_magnitude, create_origin, create_pick
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from pylot.core.pick.utils import select_for_phase
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from pylot.core.util.utils import getOwner, getGlobalTimes
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from pylot.core.util.utils import getOwner, getGlobalTimes, four_digits
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def readPILOTEvent(phasfn=None, locfn=None, authority_id=None, **kwargs):
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def readPILOTEvent(phasfn=None, locfn=None, authority_id='RUB', **kwargs):
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"""
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readPILOTEvent - function
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@ -67,18 +67,15 @@ def readPILOTEvent(phasfn=None, locfn=None, authority_id=None, **kwargs):
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minute = int(loc['mm'])
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second = int(loc['ss'])
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if year + 2000 < UTCDateTime.utcnow().year:
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year += 2000
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else:
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year += 1900
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year = four_digits(year)
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eventDate = UTCDateTime(year=year, julday=julday, hour=hour,
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minute=minute, second=second)
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stations = [stat for stat in phases['stat'][0:-1:3]]
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event = create_event(eventDate, loccinfo, etype='earthquake', resID=eventNum,
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authority_id=authority_id)
|
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event = create_event(eventDate, loccinfo, etype='earthquake',
|
||||
resID=eventNum, authority_id=authority_id)
|
||||
|
||||
lat = float(loc['LAT'])
|
||||
lon = float(loc['LON'])
|
||||
@ -123,13 +120,13 @@ def readPILOTEvent(phasfn=None, locfn=None, authority_id=None, **kwargs):
|
||||
pickID = pick.get('id')
|
||||
arrival = create_arrival(pickID, pickcinfo, phase)
|
||||
origin.arrivals.append(arrival)
|
||||
event.picks.append(pick)
|
||||
np += 1
|
||||
|
||||
magnitude = create_magnitude(origin.get('id'), loccinfo)
|
||||
magnitude.mag = float(loc['Mnet'])
|
||||
magnitude.magnitude_type = 'Ml'
|
||||
|
||||
event.picks.append(pick)
|
||||
event.origins.append(origin)
|
||||
event.magnitudes.append(magnitude)
|
||||
return event
|
||||
|
||||
@ -93,6 +93,14 @@ def fnConstructor(s):
|
||||
return fn
|
||||
|
||||
|
||||
def four_digits(year):
|
||||
if year + 2000 < UTCDateTime.utcnow().year:
|
||||
year += 2000
|
||||
else:
|
||||
year += 1900
|
||||
return year
|
||||
|
||||
|
||||
def getGlobalTimes(stream):
|
||||
'''
|
||||
|
||||
|
||||
Loading…
Reference in New Issue
Block a user