[update] add shell scripts

pylot/tomography/fmtomo_tools/submit_fmtomo_grid_utils.sh

@@ -0,0 +1,10 @@
+#!/bin/bash
+
+conda activate py37
+
+#qsub -l low -cwd -l "os=*stretch" -pe mpi-fu 40 submit_fmtomo_grid_utils.sh
+
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/"
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/pylot_tools/"
+
+python fmtomo_grid_utils.py

pylot/tomography/fmtomo_tools/submit_fmtomo_run.sh

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+#!/bin/bash
+ulimit -s 8192
+
+#$ -l low,os=*stretch
+#$ -l h_vmem=5G
+#$ -cwd
+#$ -pe smp 40
+
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/"
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/pylot_tools/"
+
+python submit_fmtomo_run.py

pylot/tomography/fmtomo_tools/submit_fmtomo_teleseismic.sh

@@ -0,0 +1,62 @@
+#!/bin/bash
+
+ulimit -s 8192
+
+conda activate pylot_311
+
+##qsub -l low -cwd -l "os=*stretch" -pe mpi-fu 40 submit_fmtomo_teleseismic.sh
+#$ -l low
+##$ -l os=*stretch
+#$ -cwd
+#$ -pe smp 40
+#$ -q "*@minos13, *@minos14"
+### WARNING fm3d_prepare_tele not compiled correctly for all cluster machines (e.g. not working on minos12, minos15)
+
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/"
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/pylot/"
+export PYTHONPATH="$PYTHONPATH:/home/marcel/git/pylot_tools/"
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_mantle_0.03-0.1_revised' \
+#'/data/AlpArray_Data/fmtomo/v6/crust_incl_lf_sm_FIX_DTS_grad_sm30_dm10' \
+#'_correlated_0.03-0.1' -n $NSLOTS --blacklist '/rscratch/minos22/marcel/alparray/station_blacklist.csv'
+# --model 'ak135_diehl_v2'
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_mantle_0.03-0.5_revised' \
+#'/data/AlpArray_Data/fmtomo/v6/crust_incl_hf_sm_FIX_DTS_grad_sm30_dm10' \
+#'_correlated_0.03-0.5' -n $NSLOTS --blacklist '/rscratch/minos22/marcel/alparray/station_blacklist.csv'
+# --model 'ak135_diehl_v2'
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_mantle_0.01-0.2_S_SKS' \
+#'/data/AlpArray_Data/fmtomo/v6_S/crust_incl_hf_KSTL_grad_sm6_dm10/' \
+#'_correlated_0.01-0.2_S*' -n $NSLOTS --blacklist '/data/AlpArray_Data/various/alparray/station_blacklist.csv'
+# --model 'ak135_diehl_v2'
+#
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_mantle_0.03-0.5_revised' \
+# '/rscratch/minos13/marcel/fmtomo_alparray/v3.5/alparray_mantle_diehl_crust_included_hf_no_init' \
+# '_correlated_0.03-0.5' -n $NSLOTS --no_write_init_nodes --model 'ak135_diehl_v2'
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_hybrid_test' \
+# '/rscratch/minos13/marcel/fmtomo_alparray/v3/hybrid_method_test_pgrid_fine' \
+# '' -n $NSLOTS #--blacklist '/rscratch/minos22/marcel/alparray/station_blacklist.csv' --model 'ak135_diehl_v2'
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_hybrid_test_diehl_v2' \
+#'/data/AlpArray_Data/fmtomo/v6/hybrid_method_test' \
+#'' -n $NSLOTS --model 'ak135_diehl_v2'
+#--blacklist '/rscratch/minos22/marcel/alparray/station_blacklist.csv'
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_hybrid_test_diehl_v2_orig_box_more_stations' \
+#'/data/AlpArray_Data/fmtomo/v5/hybrid_method_tests_diss/v5_orig_box_size_more_receiver_no_demean_CORRECTED_depth_sampling' \
+#'' -n $NSLOTS --model 'ak135_diehl_v2'
+
+#python fmtomo_teleseismic.py '/data/AlpArray_Data/dmt_database_synth_model_mk6_it3_no_rotation' \
+#'/data/AlpArray_Data/fmtomo/v6_resolution_analysis/fwi_mk6_it3_P' \
+#'_correlated_P' -n $NSLOTS --model 'ak135_diehl_v2'
+
+#python fmtomo_teleseismic.py '/data/AdriaArray_Data/dmt_database_alpadege' \
+#'/data/AdriaArray_Data/fmtomo_adriaarray/alpadege/no_crust_correction' \
+#'_correlated_0.03-0.5' -n $NSLOTS --model 'ak135'
+
+python fmtomo_teleseismic.py '/data/AdriaArray_Data/dmt_database_minimal' \
+'/data/AdriaArray_Data/fmtomo_adriaarray/alpadege/test_minimal' \
+'_correlated_0.03-0.5' -n $NSLOTS --model 'ak135'
+