Commit Graph

906 Commits

Author SHA1 Message Date
7e33502824 GUI tests 2016-06-07 13:38:35 +02:00
536019259e [adresses 195] preparing GUI elements for a new dialog widget for interactive comparison 2016-06-06 14:10:46 +02:00
de89fc83ce moved widget to utils widgets for consistency and reusability
additionally the filter for PHASES and LOC files has been modified to avoid false selection
2016-06-02 09:39:01 +02:00
2395c12b26 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-06-01 14:15:14 +02:00
a255718f59 added script to VC 2016-06-01 14:14:57 +02:00
9c8c5bb842 - 2016-06-01 14:14:12 +02:00
02117399b5 output change 2016-06-01 14:13:15 +02:00
9996033ca5 cleanup (worker) 2016-06-01 14:12:49 +02:00
0d7ee9d779 [fixed] loading of automatic picks did not plot any result (fixed in this rev) 2016-06-01 08:55:43 +02:00
7965239a92 [closes #124] PILOT event data can be loaded now 2016-05-31 15:53:23 +02:00
724032b3f6 capturing multiply stored station labels 2016-05-31 13:12:42 +02:00
e341994825 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-05-31 11:15:38 +02:00
0520df5963 bugfix 2016-05-31 11:15:30 +02:00
ae2fc73d89 parallelization 2016-05-31 11:14:51 +02:00
51aa949b56 debugging in progress 2016-05-30 17:08:35 +02:00
36b0aea86c [edit] fixing bugs (in progress) 2016-05-27 12:53:34 +02:00
618dd10c23 [task] further steps to implement pick comparison from QtPyLoT 2016-05-27 11:25:47 +02:00
53614bb5b9 [fix] fixing a bug introduced accidently by merge 2016-05-27 06:49:20 +02:00
0dd69a0e19 added default value for cores 2016-05-25 14:28:25 +02:00
ecf4a7ced7 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-05-25 14:24:51 +02:00
5057664b1d code changes for parallelization 2016-05-25 14:24:19 +02:00
e46e8cb71b [reformat] corrected formatting after merge 2016-05-25 14:22:08 +02:00
f8db6b1d9f [merge] resolved conflicts in utils due to two-sided coding 2016-05-25 14:05:25 +02:00
8ca87bc777 changes while testing parallelization of autopicker 2016-05-24 14:20:59 +02:00
a6eaac6c33 Changes during parallelization tests of autopicker 2016-05-24 14:19:37 +02:00
sebastianp
d49c90026d Merge branch 'master' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot 2016-05-24 13:23:08 +02:00
sebastianp
4962561d6c changes made to have better control of the output directory 2016-05-24 13:21:38 +02:00
46ccd44e16 changed to generation of reference grids 2016-05-23 14:25:24 +02:00
d9844fff17 added worker 2016-05-23 14:25:06 +02:00
42cbfeb787 temporary retaining of parallel tests 2016-05-23 14:24:02 +02:00
25ca11f572 minor tweaks 2016-05-23 14:22:52 +02:00
093f750aa1 tried worker function 2016-05-23 12:06:55 +02:00
41b7ca6968 [task] reformatting activeSeismoPick and editing pool mapping to work properly 2016-05-23 11:53:22 +02:00
3cc77f4868 bugfixes 2016-05-23 11:24:01 +02:00
73d71a61d5 restructuring for parallization 2016-05-23 11:23:23 +02:00
1f47f3dd85 parallization of picking algorithm 2016-05-23 11:22:39 +02:00
392a556ac4 [restructure] Wall-E wasting time 2016-05-20 14:46:10 +02:00
08df7c3304 [edit] decreased unwanted verbosity 2016-05-20 10:11:40 +02:00
54b557930f [edit] inserted verbosity option to control the amount of output 2016-05-20 09:58:10 +02:00
sebastianp
9b7db91037 [task] started to implement data processing step for checking corrupted GSE files 2016-05-19 15:35:11 +02:00
db17cb4f8d code cleanup 2016-05-19 14:24:48 +02:00
4edd5f8e52 code cleanup 2016-05-19 11:21:24 +02:00
5f740783f0 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-05-19 11:20:47 +02:00
3138bbfa93 code cleanup and commenting 2016-05-19 11:20:37 +02:00
7c5aff0a27 [fix] correctly formatting the timestring now 2016-05-19 11:16:28 +02:00
731acc7117 [double-checked] code has been double checked before running on data 2016-05-19 10:51:37 +02:00
sebastianp
521de9ee89 Merge branch 'master' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot 2016-05-19 10:25:19 +02:00
dc5d76efb8 [fix] fixing docstring problem caused by merge of conflicting files 2016-05-18 13:17:05 +02:00
eb5f028a47 Merge branch 'develop'
Conflicts:
	pylot/core/io/phases.py
2016-05-18 13:02:51 +02:00
c315b917b8 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-05-18 12:55:43 +02:00
e62ff9d68c [fix] returning variables now, docstrings corrected to be able to use single quotes in docstrings 2016-05-18 12:55:04 +02:00
dbaead4754 code cleanup + commenting 2016-05-18 12:00:45 +02:00
30e8f0c96a code cleanup and commenting 2016-05-17 16:19:44 +02:00
ca77b06293 Code cleanup 2016-05-17 11:53:32 +02:00
4a836fd1f7 [task] started to implement data processing step for checking corrupted GSE files 2016-05-13 14:56:42 +02:00
019b801603 code rearrange and minor processing changes 2016-05-12 14:01:18 +02:00
f09af16120 [task] started to implement data processing step for checking corrupted GSE files 2016-05-12 10:08:29 +02:00
a2b0854345 Merged branch develop into master 2016-05-11 14:51:30 +02:00
79e429db8d [edit] rearrangement fastens up a bit 2016-05-11 14:50:52 +02:00
8a79addb4e Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-05-11 12:02:43 +02:00
67c11558f3 Merged branch develop into master 2016-05-11 12:02:37 +02:00
46c152b7a1 improved speed on writing to file (write instead of writelines) 2016-05-11 12:02:09 +02:00
Ludger Küperkoch
c34fbe1228 Removed needless terminal output 2016-05-11 10:51:33 +02:00
Ludger Küperkoch
97ca69a07d Modified for controlling amount of terminal output using new input parameter apverbose 2016-05-11 09:54:33 +02:00
f8807a7ea6 [edit] docstring added and returning the figure instead of showing the plot
additionally hide_labels is now defined only once before going into the loop
2016-05-11 09:49:19 +02:00
63ac0107d0 [edit] implemented a plotting method for pdf dictionaries 2016-05-11 06:01:26 +02:00
c7d7acd7e3 [edit] implemented loop over PILOT database for reassessment
additionally the output of reassess_pilot_event is more verbose now
2016-05-10 09:54:21 +02:00
3705eb567b [fix] overcome numerical instabilities
due to the usage of large absolute values (timestamp) on time axis the estimation of the expectation value gets instable
2016-05-09 12:06:47 +02:00
4480854ee5 [workaround] set minimum difference of mpp with lpp and epp
this workaround elevates the difference between the uncertainty-picks and the mpp to a minimum value of three samples (needed for a reasonable pdf represetation of the pick)
2016-05-06 12:04:27 +02:00
d8a764db31 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-05-04 10:22:06 +02:00
f58c5a5f9d merge correction 2016-05-04 10:21:39 +02:00
fd27a43110 fixing import problems 2016-05-03 15:09:51 +02:00
41991c5d81 [edit] further restructuring and bugfixing 2016-05-03 13:54:59 +02:00
a82c1d39c6 [fix] fixing obvious problems in advance 2016-05-03 09:35:31 +02:00
ecb3670aeb Merge branch 'master' into develop
Conflicts:
	scripts/pylot-reasses-pilot-event.py
2016-05-03 08:58:33 +02:00
210d39882d further development on the reassessment routines for PILOT data 2016-05-03 08:46:13 +02:00
ae0c08eeb2 Merge branch 'master' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot 2016-05-02 14:10:41 +02:00
8cb4f11bf8 [edit] implementing reassessment functions 2016-05-02 14:10:11 +02:00
ec42e1bd15 added first version of fmtomo_parallel script 2016-05-02 12:08:58 +02:00
dbe47690eb Merged branch develop into master 2016-05-02 11:31:17 +02:00
ddb1ad4a15 Resolved conflicts fmtomoUtils 2016-05-02 11:28:56 +02:00
Marcel Paffrath
f906211064 fmtomo2vtk merged with fmtomoUtils 2016-05-02 11:19:06 +02:00
edd8920d54 WALL-E --- Small robot, big job! Restructuring the code and preparing implementation of a re-assessment tool for PILOT phases. 2016-05-01 21:10:30 +02:00
df44979337 [reorganize] some reorganization done to hand program to partner 2016-04-28 14:18:42 +02:00
37f9292c39 renamed class method 2016-04-28 14:03:32 +02:00
c489fad6ba [bugfix] comparison should not through an KeyError due to missing picks 2016-04-12 14:50:21 +02:00
416f4c7aa7 [bugfix] special method __nonzero__ should always return type bool 2016-04-12 14:48:57 +02:00
6181829ef6 [bugfix] make uncertainties from autoPyLoT may be corrupted
consequently there is minimum uncertainty gap between mpp and lpp/epp
2016-04-12 14:47:49 +02:00
4a9c02e1d1 [closes 195] in principle comparing automatic and manual picks works 2016-04-12 04:55:04 +02:00
9359338e81 [refs #195] make autoPyLoT export automatic picks in QuakeML format 2016-04-11 13:59:32 +02:00
9519372247 [bugfix] autopick accidently interchanged latest and earliest possible pick 2016-04-11 13:57:59 +02:00
2139674afa [bugfix] guessed that checking the same variable twice was not intended
instead of checking for mpickX's twice it was probably meant to check for lpickX's value
2016-04-11 12:39:46 +02:00
a9cd53886b [enhancement, task] there was no routine to read obs pick files available; default values for autopicking should be the same for all parts of PyLoT, thus defaults should be defined only once 2016-04-11 05:47:38 +02:00
2a8729c39b [refs #195] changed some default parameters for plotting the histograms 2016-04-08 14:35:20 +02:00
f15e27e81d [refs #195] hitsogram plots implemented for expectation and standard deviation 2016-04-07 16:29:29 +02:00
b5345bb5d3 [refs #195] implementation of histogram plots 2016-04-07 15:47:11 +02:00
27e334609c [refs #195] plotting method for Comparison object implemented 2016-04-06 11:27:09 +02:00
5f9a9242d1 [refs #195] realized an object oriented implementation of comparison
comparing pdf represented picks should be easy, thus objects returning everything needed are implemented; histograms and other plots are planned next
2016-04-05 22:19:55 +02:00
a475b366d4 [adresses #195] comparison dictionaries can now be compiled from QuakeML files 2016-03-31 14:29:29 +02:00
5fcaddb028 [adresses #195] started to implement comparison function 2016-03-31 09:00:49 +02:00
1fecec1696 [adresses #195] read_data now working correctly on QuakeML data 2016-03-31 08:50:09 +02:00
bd2bad7367 [adresses #195] task related new function introduced 2016-03-30 15:25:06 +02:00
76788c0223 [refs #195] initial import of new interfaces module 2016-03-30 11:45:49 +02:00
7a712ca37c [fixes #194] automatic filtering works also when switching phase selection
Switching the phase selection without picking the last onset did not filter according to the selected phase filter parameter. With this revision a displaying bug showing muliple '( filtered, filtered, filtered)' statements due to switching the phases is fixed as well.
2016-03-30 09:12:56 +02:00
d7cfd0d176 WALL-E: Einmal aufräumen und zurück! 2016-03-30 08:14:58 +02:00
320b7b7219 [bugfix] pick blocker was not reset after phase was picked 2016-03-29 14:42:51 +02:00
2d66248cf9 [fixes #172] now also in overview all horizontals are plotted 2016-03-29 14:06:57 +02:00
fef1a95391 [fixes #193] fixed bug introduced by component mapping
fixes a bug which was introduced in revision b8d680f54f
2016-03-29 11:40:16 +02:00
4c5b58dbf1 [addresses #190, closes #192] handles unknown picker information
pick tag is set to 'Unknown' for loaded data that do not provide picker information when saved with PyLoT prior to revision 06576586c6
2016-03-29 08:24:32 +02:00
cee48146d0 [closes #178] makes use of the new status variable pick_block introduced as filter_block to solve #174 2016-03-29 07:58:20 +02:00
a1c79b554a Merge branch '174' into develop 2016-03-25 05:08:09 +01:00
65df2c7dde [closes #174] now the filter button in the picking window is no toggle button anymore and has no effect when in picking mode 2016-03-25 05:07:18 +01:00
06576586c6 [edit] make use of new pick tag
find out the person's name for tagging the picks set within PyLoT
2016-03-23 12:00:54 +01:00
722e21f582 [edit] avoid catching unspecified Exceptions
specific Exception catchment is better than general; additionally errors are raised for better debugging control
2016-03-23 11:57:07 +01:00
31d56cb287 [edit] introducing picker tag
New tag introduced to distinguish between pickers (either person's or programs name)
2016-03-23 11:48:58 +01:00
438b2706b7 [edit] removed calls to names marked as deprecated
with the last update of obspy some modules and functions names will be removed in future releases and consequently have been marked as deprecated; PyLoT now uses the desired names
2016-03-22 10:52:20 +01:00
cad6ed2274 [edit] exit if no waveform files are selected
PyLoT will only start if waveformfiles are selected
2016-03-22 10:49:06 +01:00
7225da87db [edit] reformatted code
Code indentation and PEP 8 violations automatically reduced with IDE tool
2016-03-22 08:42:09 +01:00
fa6626d62a [edit] catch reference before assignment
charactersitic function variable might be referenced before they are assigned; now they are assigned as None and calls to assert help finding wrong definitions if not assigned correctly within if clause
2016-03-21 12:06:11 +01:00
d954c3bbe8 [edit] restructuring autopicking module
renamed several function and classes, moved script files to scripts
2016-03-21 11:14:16 +01:00
b8d680f54f 189 Channels shown in wrong order. 2016-03-18 15:35:12 +01:00
15080f1699 [fix] fixed the nonzero test for pdf definition that all values have to be greater than zero and the integration over the whole interval has to evaluate to 1 with given precision 2016-03-09 11:21:33 +01:00
a5fe838514 added a str representation for the pdf class 2016-03-09 06:22:26 +01:00
f3467221cc finished implementation of summation of two independent variables represented by a pdf 2016-03-09 06:21:48 +01:00
2de79eac77 [change] moved recursive function for broadcasting pdf in a new shape into the class' body 2016-03-09 06:19:41 +01:00
c651b5ca78 Merge branch 'develop' of ariadne.geophysik.ruhr-uni-bochum.de:/data/git/pylot into develop 2016-03-08 20:36:12 +01:00
db4dd47daa [bugfixes] made some fixes to the subtraction method; in some cases ValueErrors are raised which are now handled but raised as Warning 2016-03-08 20:35:56 +01:00
e6f404a219 [closes #188] picks are set correctly now
earliest and latest possible picks are now derived from the actually displayed (in some cases filtered) waveforms
2016-03-07 10:15:42 +01:00
9f7f00314a [closes #187] pdf methods for some values like expectation and plotting ready 2016-03-04 14:13:44 +01:00
e6b5848f36 [add] untested implementations of standard deviation and probability value determination methods to class ProbabilityDensityFunction 2016-03-04 06:27:11 +01:00
78a5a5117a [add] new function added which return the index of the value of an array which is nearest to a desired value 2016-03-04 06:25:17 +01:00
4606f84809 [new] implementing comparison methods into pdf class 2016-03-03 15:14:17 +01:00
18785edf68 [fixes #186] filteroptions are only parsed if they are not NoneType 2016-03-03 14:02:49 +01:00
c2168dbef3 [fixes #185] filtering of waveforms now conserved for picking 2016-03-03 11:12:27 +01:00
6108519acb [closes #182]
noiselevel now determined as the maximum of the absolute values of the noisewindow (holds also for signallevel); now the SNR and noiselevel is determined from the filtered waveform
2016-03-03 10:40:20 +01:00
848d11270b [fixes #181] now picking on horizontal components 1, 2 and N,E is possible 2016-03-02 13:37:40 +01:00
827a0da210 [fix] imports to obspy's read_events changed due to deprecated naming of function readEvents 2016-03-02 13:36:18 +01:00
c09a3271f9 make use of new option to getSNR 2016-03-02 11:08:14 +01:00
8c7a2af2db [fix] do not try to proceed if no picks are available 2016-03-02 11:07:32 +01:00
5e26519d66 [fix] avoid usage of hardly programmed indices 2016-03-02 11:06:31 +01:00
96ea0d7ac3 improved readability of formula 2016-03-01 12:26:56 +01:00
e7b454bae8 [edit] just style related changes 2016-02-16 08:47:42 +01:00
3ee221b8eb [edit] implementation of difference of two independent random variable as the correlation of the PDFs completed; summation pending due to unclear axis determination of the resultant PDF 2016-02-15 20:15:54 +01:00
f2cad2e151 [edit] changed implementation name from findlimits to commonlimits which is probably more intuitive for the user along with a new signature using other instead of giving the limits in advance 2016-02-15 20:15:54 +01:00
d5e16d64da [edit] implemented method to derive limits for the special methods for addition and subtraction 2016-02-15 20:15:54 +01:00
2956f3b733 [edit] subclassing has been substituted by classmethod fromPick opportunity for creating a PDF object 2016-02-15 20:15:54 +01:00
e7a5e388f6 [edit] implementation of probability density function interface ready for testing 2016-02-15 20:15:54 +01:00
303a5f9cf0 [edit] probability density function superclass implemented due to the different character of these functions 2016-02-15 20:15:54 +01:00
ada9f4e780 [new] started implementation of probability density representation routines 2016-02-15 20:15:54 +01:00
sebastianp
0d0b43103b editing of Docstring 2016-02-03 14:49:16 +01:00